Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0400 ATGTCGTCAAGCTTCCCCAACACGGCGGCGGAAGGCCGGAGGTCCGGCAAGGTACTGGAAAAATCCACTTTTTCTCAGACTTGCAGCCTCCTGAGCCAGTTCCTGAAGGAGAAACGTGCTTCTTCTGGTGATTCCAACCTTGGAATGGGTGTGAAAATGGAACCTAAAGCGAGTACCAAGGATTTGTTAGGCAGCCTGCAAAATTCAGATGGGGCTTTGAAACTAAGCGCTTCTGCCATGGAATTGCTTCCCCAGCTTGTGGAAAACCCCTGCATTAAGAAGTCTATTAGGTCACGGGAACCTGAATCTCCCCAATTAACAATATTCTATGCTGGAAAAATGTTGGTGTTTGATGCTTTTTCGCCAGAGAAAGCGACGGAGGTCATGGAGTTGGCTACCAACTTAGCCTCGGACAATTCTGGCACCGGCACCGAAGAAACTCCTCCTAGTGCTCCGGTAATTACCACTGAAAAATTGGCTGTGTCCAAAGTTCCTCAAACAAACATATCCTCAGAAACCCCTAAGCCAGGAAGCCAAGGGGTTGGTTCAGATATGAGGTACCCAAGGAGAGCTTCACTTCTAAAATTTCTTGAGAAAAGAAAAGAGAGGGTTAATGCTAGAGGGCCATACCAAATGAACAACCACAAGGCAGAAGGAGGCAGTTCAGGTGAACCAGAAGATCAGTGTTCGAAACAGTTTGACCTTAACTTGTAG 714 0.472 MSSSFPNTAAEGRRSGKVLEKSTFSQTCSLLSQFLKEKRASSGDSNLGMGVKMEPKASTKDLLGSLQNSDGALKLSASAMELLPQLVENPCIKKSIRSREPESPQLTIFYAGKMLVFDAFSPEKATEVMELATNLASDNSGTGTEETPPSAPVITTEKLAVSKVPQTNISSETPKPGSQGVGSDMRYPRRASLLKFLEKRKERVNARGPYQMNNHKAEGGSSGEPEDQCSKQFDLNL 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0400 237 MobiDBLite consensus disorder prediction 191 206 - -
Aed2g0400 237 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 9 231 IPR040390 -
Aed2g0400 237 ProSiteProfiles Tify domain profile. 99 134 IPR010399 -
Aed2g0400 237 Pfam Jas motif 189 211 IPR018467 -
Aed2g0400 237 SMART tify_2 99 134 IPR010399 -
Aed2g0400 237 PANTHER JASMONATE ZIM-DOMAIN PROTEIN 9 231 - -
Aed2g0400 237 MobiDBLite consensus disorder prediction 163 237 - -
Aed2g0400 237 Pfam tify domain 100 132 IPR010399 -
Aed2g0400 237 MobiDBLite consensus disorder prediction 163 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0400 Aed-Chr2 2755446 2758340 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0400 1 212 Tify Gene Family AT1G19180 34.286 1.40e-21 88.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Aed2g0400 tify 7.7e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0400 K13464 - gmx:100778559 379.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0400 2 2755446 2758340 Aed2g0400 2 2755446 2758340 ECH