Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0399 ATGGCCATGGGCATAGCAATCCTCCTGCAGCCAACCCTCATGATCATCGTCGCTTTGCCTGTGATTTATTCCATGACAGAAGCTGAAGCTCTGGTGAGTCTCAAAAGCACTTTCACCAAAGCCGAACTTTTGGACAGTTGGGTCGTTGGTGGTTCTGCACCTTGTAGCGACGATGATCAATGGGAAGGTGTTATTTGCAACAATGGCGTTGTCACCGGACTTCGCCTTGGAAGAATGGGGCTAGTAGGGGAAATACACGTTGATCCGTTGCTCGAACTCAAGGGTCTTCGAACTATAAACCTCAACAACAACGCTTTTTATGGTTCCATGCCTGAGTTTAACCGAATTGGCTTCTTGAAGGCCTTGTATTTGCAAGGAAACAAGTTTTCTGGGGAGATTCCTGCAGAATATTTCCAGAGAATGAGGTCTTTGAAGAAAGTGTGGCTCTCTGACAACAAATTTACTGGGAATATTCCAACATCGTTGGCTGATATGCCTCAGATTACAGAGTTGCACCTTGAAAACAACCAGTTTAGTGGAAACATTCCTGATATCAGCACCCCATCGTTGGTGAAATTTGATGTTTCCAACAACAAATTGGTAGGTGGAATCCCAGCTGGTTTGTTGAGATTCAACGAGAGTTTGTTTGCAGGGAATGCGGGGCTTTGCGGTGAGAAGTTAAAGAAATCATGTTACAACAACACGGCAATAATGGGTAGCCCAAGTCCTAGTCCAATGGATGATGATAATGATGACATGCTTTCTCTGCCAGATAGTACTAGCTCAATGGAGATTGCTGGCATTATAGTAGCGAGTGTTTTCTTCCTCTCACTGATTGTGTTTTTGATAGTGAGATCAAGGAGGAAGAAGGAGGAGGAAACATTTGATCATACGATTGGACAAGAGGGTAATGAATATCAGGGGGGTTCAGTGGCAGTTCAAGTGACTGCACCAGTGAAAAGGGACAATACAGCTTCATTAATTGCAGCAGGTTCAGCAATGAACAGAACATCGTCCAGAAGACGATCAGGATCAGTATCATCTGTATCTGCTACACCCAAAAACGTTGGAGAGCTTGTGATGGTGAATGATGAGAAGGGCATGTTTGGGTTGCAAGATTTGATGAGGGCCGCCGCGGAAGTGCTTGGAAATGGAAGCTTTGGATCCTCTTACAAAGCCGTCATGGCTAATGGAGTCGCAGTGGTGGTCAAAAGAACCAGAGAGATGAACTTTCTCCAGAAAGATGACTTCGATGCAGAGATGAGGAAGCTAATAAAGCTTAAACATTGGAACATATTGACCCCTTTAGCTTATCATTTCAGAAAGGATGAGAAACTCATCGTCTCTGAGTATGTTCCCGGAGGAAGTCTACTCTTTTCACTTCATGGTGACAGGGGACCATCGCATGCTGAGCTGGATTGGCCTGCTCGTATGAAGATTGTACGAGGAATAGCGGAAGGATTGCGTTATATTTACACAGAACTAGCTTCCTCGGATCTCCCACACGGCAACCTCAAATCCAGCAATGTTCTCCTCGGACCAGACAACGAGGCAATGCTGGCAGATTACGGGTTCAGCGGCATGGTCCACCCTTCAAGCGCGGCACACACACTATTCGCATACAAGGCACCGGAGGCAGCAGAACACGGCCAAGTTTCCCACAGTTGCGACGTATACTGTCTCGGAGTTGTGATAATTGAGATACTCACAGGGAAGTTCCCATCTCAGTATCTCAGCAATGGAAAGGGTGGAACCGATGTGGTGCAGTGGGTTGAAACGGCAATCTCGGAGGGAAGGGAATCAGAAGTGCTTGATCCAGAGATTGCAAGCTCGAGGAGTTGGCTTGGTGAGATGGAGCAGCTACTCCACATCGGTGCTGCTTGCACTCAGACCAACCCTCAACGCCGGTTAGAGATGGGGGAAGCCATTAGAAGGATACAGGAGATGAAAACCGAGGTTGTTGGACGACAAGAATCAAGAACAATGCCATCTCATAGTCAGGGACAAAGACATGGAACAAACAGCTTTGGAAGCATGGAAAGTGTTGAATTTGGCAGCTAA 2061 0.4653 MAMGIAILLQPTLMIIVALPVIYSMTEAEALVSLKSTFTKAELLDSWVVGGSAPCSDDDQWEGVICNNGVVTGLRLGRMGLVGEIHVDPLLELKGLRTINLNNNAFYGSMPEFNRIGFLKALYLQGNKFSGEIPAEYFQRMRSLKKVWLSDNKFTGNIPTSLADMPQITELHLENNQFSGNIPDISTPSLVKFDVSNNKLVGGIPAGLLRFNESLFAGNAGLCGEKLKKSCYNNTAIMGSPSPSPMDDDNDDMLSLPDSTSSMEIAGIIVASVFFLSLIVFLIVRSRRKKEEETFDHTIGQEGNEYQGGSVAVQVTAPVKRDNTASLIAAGSAMNRTSSRRRSGSVSSVSATPKNVGELVMVNDEKGMFGLQDLMRAAAEVLGNGSFGSSYKAVMANGVAVVVKRTREMNFLQKDDFDAEMRKLIKLKHWNILTPLAYHFRKDEKLIVSEYVPGGSLLFSLHGDRGPSHAELDWPARMKIVRGIAEGLRYIYTELASSDLPHGNLKSSNVLLGPDNEAMLADYGFSGMVHPSSAAHTLFAYKAPEAAEHGQVSHSCDVYCLGVVIIEILTGKFPSQYLSNGKGGTDVVQWVETAISEGRESEVLDPEIASSRSWLGEMEQLLHIGAACTQTNPQRRLEMGEAIRRIQEMKTEVVGRQESRTMPSHSQGQRHGTNSFGSMESVEFGS 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0399 686 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 8 654 - -
Aed2g0399 686 Gene3D Transferase(Phosphotransferase) domain 1 452 668 - -
Aed2g0399 686 Pfam Leucine rich repeat N-terminal domain 27 67 IPR013210 -
Aed2g0399 686 MobiDBLite consensus disorder prediction 657 686 - -
Aed2g0399 686 Pfam Protein kinase domain 380 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g0399 686 Gene3D Ribonuclease Inhibitor 118 233 IPR032675 -
Aed2g0399 686 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 8 654 - -
Aed2g0399 686 ProSiteProfiles Protein kinase domain profile. 376 654 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g0399 686 SUPERFAMILY L domain-like 31 211 - -
Aed2g0399 686 Gene3D Ribonuclease Inhibitor 21 116 IPR032675 -
Aed2g0399 686 MobiDBLite consensus disorder prediction 653 686 - -
Aed2g0399 686 Gene3D Phosphorylase Kinase; domain 1 343 451 - -
Aed2g0399 686 Pfam Leucine rich repeat 119 178 IPR001611 GO:0005515
Aed2g0399 686 SUPERFAMILY Protein kinase-like (PK-like) 380 645 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0399 Aed-Chr2 2746003 2749240 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0399 20 651 Receptor kinase-like Gene Family AT5G20690 43.096 6.71e-180 525
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Aed2g0399 Pkinase 3.1e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0399 - - gmx:100809208 1013.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0399 2 2746003 2749240 Aed2g0399 2 2746003 2749240 ECH