Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0381 ATGTCTCATCATCAGGAGCAAGCTTTAGTGTCCCTTCTCTCCCAGCTGGCTCTTTCCTTCGACGGTGCCGTTTTGGGCTTCGCCTTCGCCTACGCCGCCGTCCGCACCCTCTTCAAATTCTCCGCCACCTCCGCCGCTCTCCGCAAGCTCCGCCGCGTCCCCTCCCTCTCCGTCTCCGACCTCCGTTCCCTCCTCGTCGATACACCCTCCGACTCCGACGGAAACTCCGACGCTGGCCGAGTCGTAATTGTCCGCGGCACCGTCGACGCCAAGTCCGCCGTCGACGGCACCTGGAAAACGTTGAGACCTGGCGTATTGGTTTCTCGCGAGTCCGGCGACAGAGGTGTCATTCTTCAGAGAACTCAAACGTGTATATACAATGAATGGAAAGGCTTACTTGGATGGACTTCTGATCTTCGAGCCATATTTGCAAGATCTTGGAGACAACAAGAGTCTACATCTTTAAGGAAGGTGCCTTTTGTTCTAATTGATGTTGGACGGCGGCCAAATTCTGAGTATGTTGTTGTCAACATGGATGGCTCAAGACATCCTTTACCTCTGACAACGGTTTATCATAAATTGCAACCAATAACTGCATCTCCTTATACTTTCTTGCAAGCACTTTTTGGGCATGAATATCCGGTTGGATTACTAGATGAAGAGAAAATTCTTCCATTGGGGAAGGATATCACTGCTGTTGGCCTTTGCAGTTTCAAAAATGGAATTGCTGAAATTAAGTCTTGCAAAGATCTACCATATTTTTTGTCTGACTTGAGTAAAGATCAGATGATAGTAGATCTTTCCATCAAGACAAAAATACTGTTTTGGGGTGGTATTGCTCTAGGTTCAATGTCAGTTGGGGTACTTGGCTATGCAGTTGTGAGGAACTGGAATAAGTGGAAACAGTGGACGCAACAGAGGCAGCTCCAGCAACAAAGGCAAGCAGTGAGTGAAGTTGAACCTCAGGTGGAGGATGAGATTGAAGATGTTTCAGATGGACAATTATGTGTTATATGTCTGATGAGGAGAAGGCGTTCTGTCTTCATTCCCTGTGGGCATCTTGTGTGTTGCCAAGGGTGTGCCATATCAGTTGAACGAGAAGTCGCGCCCAAATGCCCTGTTTGTCGTCAGGAGATTCGAGACTCAGTGCGGATTTATGAATCTTGA 1167 0.4816 MSHHQEQALVSLLSQLALSFDGAVLGFAFAYAAVRTLFKFSATSAALRKLRRVPSLSVSDLRSLLVDTPSDSDGNSDAGRVVIVRGTVDAKSAVDGTWKTLRPGVLVSRESGDRGVILQRTQTCIYNEWKGLLGWTSDLRAIFARSWRQQESTSLRKVPFVLIDVGRRPNSEYVVVNMDGSRHPLPLTTVYHKLQPITASPYTFLQALFGHEYPVGLLDEEKILPLGKDITAVGLCSFKNGIAEIKSCKDLPYFLSDLSKDQMIVDLSIKTKILFWGGIALGSMSVGVLGYAVVRNWNKWKQWTQQRQLQQQRQAVSEVEPQVEDEIEDVSDGQLCVICLMRRRRSVFIPCGHLVCCQGCAISVEREVAPKCPVCRQEIRDSVRIYES 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0381 388 SUPERFAMILY RING/U-box 335 381 - -
Aed2g0381 388 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 319 388 IPR013083 -
Aed2g0381 388 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SPL2 1 388 - -
Aed2g0381 388 Pfam E3 Ubiquitin ligase 142 289 IPR022170 GO:0004842|GO:0006996|GO:0016567
Aed2g0381 388 SMART ring_2 336 375 IPR001841 -
Aed2g0381 388 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SPL2 1 388 IPR044247 GO:0004842
Aed2g0381 388 Pfam Zinc finger, C3HC4 type (RING finger) 334 381 - -
Aed2g0381 388 ProSiteProfiles Zinc finger RING-type profile. 336 376 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0381 327 385 C3H Transcription Factor Family AT3G06140 35.593 7.94e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0381 K15688 - gmx:100811939 673.315
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0381 2 2593656 2600101 Aed2g0381 2 2593656 2600101 ECH