Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0380 ATGATCATGGAACCAAATCCAACATCAGATCACAGTCTTGACTGGTTTGAAGGTTCTGTGTCTAATTACTTTCCACCATTCTTAGATTATCCATATAACTCTAATGACATCCAAGAGTATGATCAGTTGTGGGATCAAGACATAACCAGCAGCCACTACCAAGCTGATGATACCAATACTAATACCAGTTCCCCTAATAATGCCACCAACATTGCCACTAACACAGCACCCCTTGAGCCTTGTGACTCTAACAACAACCTACCACTTTCTGATTTGCCCAAGAAAAGAAATGCCACTGATGACTCAAGTCCCAAACCCCCACAAAACCACAAGCACAAGAAAATCAAGACCAAACCAATGAATAATGAAGATGCAGAGGGGACAACAACAACAGTTAGAAAATCTGGTGGGAACAAGAAAGGTGGAGCTAAGGCCAATGGAAACAACTGCAACAACAAGGAAGGTAGGTGGGCAGAACAGTTGCTGAACCCTTGTGCTGCAGCCATAACTGGTGGAAACCTTAACCGTGTGCAACACCTCTTGTATGTTCTCCATGAGTTAGCATCACCTACTGGTGATGCTAACCACAGGCTTGCAGCACATGGTCTTAAAGCACTCACACACCATCTATCATCATCTTCTCCAACATCTACTACCTCTTCAGGGTCTATAACTTTTGCATCCACCGAGCCACGGTTCTTCCAGAAGACACTACTCAAGTTCTACGAGGTTAGCCCTTGGTTTTCCTTTCCCAACAACATAGCAAATGCTTCCATCCTTCAAGTTCTTGGTGATCAAGACACTGATAACTCACTCACCCTTCACATCCTTGACATTGGAGTCTCTCATGGAATGCAATGGCCAACCTTTCTAGAGGCCTTGAGCCGCAGACCAGGTGGACCTCCTCCATTGGTTCGCCTCACGGTGGTTACTGCTTCCTCCACTGAAAATGACACACCTTTTTGTATTGGTCCTCCTGGTGATAACTTCTCTTCTAGACTCCTTGGTTTTGCTCAGTCAATGAATGTTAATTTGCAGATAAACAAGCTTGATAACTGTCCCTTACATACTCTGAATGCCCAAAGTGTTGACACCTCCCCGGATGAAATCTTTGTTGTGTGTGCACAGTTTAGGTTGCATCAGTTGAATCACAACAACACCCCTGATGAGAGAAGTGAGTTTCTGAAAGTGTTGAGGAGCATGGAGCCAAAAGGGGTGATACTAAGTGATAACAACATGGGATGTTGTTGTTGCTGCAATTGTTGTGGGGATTTCGCCACTGGATTCTCTAGAAGGGTTGAGTACTTGTGGAGGTTTTTGGACTCGACAAGTGTAGCATTCAAGGGGCGTGAGAGTGATGAAAGGAGAGTGATGGAAGGTGAGGCTGCGAAGGGAATGACAAACCAGCGCGAGATGAATGAAGGGAAGGAGAAATGGTGTGAGAGAATGAAAGAGGCAGGGTTTGTGGGAGAAGTGTTTGGAGAGGATGCAATAGATGGAGGTAGAGCTTTGCTGAGGAAGTATGATAGTAATTGGGAGATGAAAGTTGAAGATGACAATAGAAGTGTTGGACTAGGGTGGAAGGGGCAACATGTTTCTTTCTGTTCTTTGTGGAAGCTGGATGGGAATGATCACAGCTCAACATTTACATCATGA 1656 0.4475 MIMEPNPTSDHSLDWFEGSVSNYFPPFLDYPYNSNDIQEYDQLWDQDITSSHYQADDTNTNTSSPNNATNIATNTAPLEPCDSNNNLPLSDLPKKRNATDDSSPKPPQNHKHKKIKTKPMNNEDAEGTTTTVRKSGGNKKGGAKANGNNCNNKEGRWAEQLLNPCAAAITGGNLNRVQHLLYVLHELASPTGDANHRLAAHGLKALTHHLSSSSPTSTTSSGSITFASTEPRFFQKTLLKFYEVSPWFSFPNNIANASILQVLGDQDTDNSLTLHILDIGVSHGMQWPTFLEALSRRPGGPPPLVRLTVVTASSTENDTPFCIGPPGDNFSSRLLGFAQSMNVNLQINKLDNCPLHTLNAQSVDTSPDEIFVVCAQFRLHQLNHNNTPDERSEFLKVLRSMEPKGVILSDNNMGCCCCCNCCGDFATGFSRRVEYLWRFLDSTSVAFKGRESDERRVMEGEAAKGMTNQREMNEGKEKWCERMKEAGFVGEVFGEDAIDGGRALLRKYDSNWEMKVEDDNRSVGLGWKGQHVSFCSLWKLDGNDHSSTFTS 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0380 551 MobiDBLite consensus disorder prediction 54 150 - -
Aed2g0380 551 MobiDBLite consensus disorder prediction 122 150 - -
Aed2g0380 551 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 4 539 IPR005202 -
Aed2g0380 551 MobiDBLite consensus disorder prediction 54 92 - -
Aed2g0380 551 MobiDBLite consensus disorder prediction 94 108 - -
Aed2g0380 551 Pfam GRAS domain family 159 539 IPR005202 -
Aed2g0380 551 ProSiteProfiles GRAS family profile. 149 539 IPR005202 -
Aed2g0380 551 PANTHER NODULATION-SIGNALING PATHWAY 1 PROTEIN-LIKE 4 539 IPR030015 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0380 Aed-Chr2 2591370 2593025 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0380 1 539 GRAS Transcription Factor Family AT3G13840 50.274 2.23e-166 480
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Aed2g0380 GRAS 3.4e-74 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0380 - - gmx:100810818 908.672
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0380 2 2591370 2593025 Aed2g0380 2 2591370 2593025 ECH
Aed2g0380 2 2591370 2593025 Aed1g1318 1 12356664 12357884 PCT