Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0371 ATGATGAGTGCAAGTGCAAGAAATAGGTCTCCTTTCACACAAACTCAGTGGCAAGAGCTCGAGCAACAAGCTCTTGTTTTTAAGTACATGGTTACAGGAACACCTATTCCACCAGATCTCATCTACTCTATTAAAAGAAGTCTAGACACTTCAATTTCTTCAAGGCTCTTCCCACACCATCCAATTGGGTGGGGATGTTTTGAAATGGGATTTGGCAGAAAAGTAGACCCAGAGCCAGGAAGGTGCAGAAGAACAGATGGCAAGAAATGGAGGTGCTCAAAGGAAGCATATCCAGACTCCAAGTACTGTGAAAGACACATGCACCGAGGCAGAAACCGTTCAAGAAAGCCTGTGGAAGTTTCTTCAACAACAAGCACCGCCAAAAACACCTCCCAAACAATCCCATCTTATACCAGAAACCTTTCCTTGACCAATCCCAATCCCAACCCCAACATCACTAATTCACCGAGAGCTTTCTTCCCAGAAGCATCAGGATCAGCTAGGAGCTACACTGACTCATACCAACAACTATCAATGAGCTCCTACAAGTCCTATTCAAACTCCAACTTTCAGAACATCAATGATACCACCAACCCAAGACAACAAGAGCAGCAGCAACAACAACACTGCTTTGTTTTGGGGACAGACATCAAATCAACAAGACCAAGCAAAGAGAAAGAAGAAGCTGAGACAACAACAGGTCAGAGACCCCTTCACCGTTTCTTTGGGGAGTGGCCACCAAAGAACACAGCAGATTCCTGGCTAGATCTTGCTTCCAACTCCAGAATCCCAACCGTTGTTATTATGAGCTGGTGGATACGGCCAAAGAGAGAGAGACTTGTTGATAAAGATCAGTGTTTTGTGGCTGGGGTGATTTTCCTTTTGCAAAAGGTGTGA 897 0.4482 MMSASARNRSPFTQTQWQELEQQALVFKYMVTGTPIPPDLIYSIKRSLDTSISSRLFPHHPIGWGCFEMGFGRKVDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEVSSTTSTAKNTSQTIPSYTRNLSLTNPNPNPNITNSPRAFFPEASGSARSYTDSYQQLSMSSYKSYSNSNFQNINDTTNPRQQEQQQQQHCFVLGTDIKSTRPSKEKEEAETTTGQRPLHRFFGEWPPKNTADSWLDLASNSRIPTVVIMSWWIRPKRERLVDKDQCFVAGVIFLLQKV 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0371 298 Pfam WRC 77 119 IPR014977 -
Aed2g0371 298 MobiDBLite consensus disorder prediction 219 234 - -
Aed2g0371 298 Pfam QLQ 11 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
Aed2g0371 298 ProSiteProfiles QLQ domain profile. 11 46 IPR014978 GO:0005524|GO:0005634|GO:0006355
Aed2g0371 298 PANTHER GROWTH-REGULATING FACTOR-LIKE PROTEIN 157 266 - -
Aed2g0371 298 PANTHER GROWTH-REGULATING FACTOR-LIKE PROTEIN 1 154 - -
Aed2g0371 298 MobiDBLite consensus disorder prediction 105 164 - -
Aed2g0371 298 PANTHER - 157 266 IPR031137 GO:0005634|GO:0006351|GO:0032502
Aed2g0371 298 PANTHER - 1 154 IPR031137 GO:0005634|GO:0006351|GO:0032502
Aed2g0371 298 SMART QLQ_2 10 46 IPR014978 GO:0005524|GO:0005634|GO:0006355
Aed2g0371 298 ProSiteProfiles WRC domain profile. 76 120 IPR014977 -
Aed2g0371 298 MobiDBLite consensus disorder prediction 117 164 - -
Aed2g0371 298 MobiDBLite consensus disorder prediction 215 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0371 Aed-Chr2 2544075 2546332 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0371 1 119 GRF Transcription Factor Family AT3G13960 70.968 6.56e-64 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Aed2g0371 WRC 1.5e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0371 - - rcn:112189816 294.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0371 2 2544075 2546332 Aed2g0371 2 2544075 2546332 ECH