Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0369 ATGAGTAACTGGTTGGGTTTCTCTCTTACTCCACACTTGAGGATTGATGAAGAATTTGAGAGAGAAAACCAAGAGCGTGCAGCAGGAGGAGGAGGGTACCATACTCCTCCTTCTTCTCACCCTCACTTATCTGTTATGCCTTTGCGCTCTGATGGCTCTCTCTGTGTTGCTGACTCCTTCACCCACTCTGCTGCATCTCAAGAATGGAGATATGATGGAGGGAATTCCAATGAAGAAGGCCCAAAGCTTGAAGACTTTTTGGGTTGCTACTCAAACTCCCCAAGTAAAGTCTTTTGCCAAGACTCTCAACATGACCAAAATCAAAGCCAGAACAATGTTTCAAAAATCAATGTTAATGTAGCACCAAGCTTTTGCACCAACAATGCAGAGATTGAAACTGGGGAGAGTCTCACGAACTCTTCTTCCTTGCTCCAATCTTTCCATGCATATAATGATAACTCACATGCTCTTATCCCCACCAACGGCATGTACAAGTCCTGGATGGCACAAACTCAGTTTTCTTCTGATGGAAAACCTTCAACAACTGATGCTAATGGGTGTAGTTTTCAATCTCTGTCACTCACTATGAGTCCCAGTGTGCAAAATGGGGTGGGTGCAATTTCCTCTGTTCAAGTGAGTGAGGATAGTAGGAAACGGGGCATGGCAAAATCACATGCTAGAGAACCAGTCCCTCGCAAATCTATTGACACTTTTGGGCAGAGAACATCTCAATATCGTGGTGTTACAAGGCATAGATGGACTGGGAGATATGAGGCCCATTTGTGGGATAATAGTTGCAGAAAAGAAGGGCAAACAAGGAAAGGAAGGCAAGGTGGTTATGATAAGGAAGAAAAAGCAGCAAAGGCTTATGACTTAGCTGCACTCAAGTATTGGGGTCCAACAACTCACATAAATTTCCCTTTAAGCACTTATGAGAAGGAACTTGAAGAGATGAAGCACATGACCAGGCAAGAATTTGTCGCCAATTTAAGAAGGAAAAGCAGTGGATTTTCAAGAGGGGCATCTGTGTATAGAGGTGTGACAAGACACCATCAACATGGAAGGTGGCAGGCCAGAATAGGAAGGGTTGCAGGAAACAAGGACTTGTATCTTGGTACATTTAGCACACAGGAAGAAGCTGCTGAAGCATATGATATAGCAGCAATCAAGTTCAGGGGAACAAGTGCTGTGACCAACTTTGACATAAGTAGGTATGATGTGAAGAGAATCTGCTCAAGCTCCACTCTCATTGCAGGAGATCTTGCTAAACGGTCTCCTAAAGAACCATCAGCTCTGGTTCCTGCTGAGGACTTCAATTCGAGCGGTTCATCATCAATGCCACCGCTGGCTTCTCAGCCTGCACCTCCTATGGCTATAACTGATGGTGGTGAACATTCTGATGAGTTGTCCAACATGATGTGGAATGCCAGCAGTGATGTGCAAGTGCAAGCACAGAATGAGAGTGTTAACAACAACAACAATGTCACTGAATCATCATCATCACAACAGGTTTCACCAAGCAGTAACAAGGATGCTGCTTTGAACCCTCAGAGCCCCATTGCGTTTGGAGTCAGTGGAGCAGATTATGGACATGGCTACTTCACTTTGGATGGACCAAAATATGATGATGGAAACAATGAAAACGACCACATGAGCACCAATAGGCTTGGAAATTTGGGATTGGTTAATCAAGTTCCCATGTTCGCTTTATGGAATGAATGA 1722 0.4425 MSNWLGFSLTPHLRIDEEFERENQERAAGGGGYHTPPSSHPHLSVMPLRSDGSLCVADSFTHSAASQEWRYDGGNSNEEGPKLEDFLGCYSNSPSKVFCQDSQHDQNQSQNNVSKINVNVAPSFCTNNAEIETGESLTNSSSLLQSFHAYNDNSHALIPTNGMYKSWMAQTQFSSDGKPSTTDANGCSFQSLSLTMSPSVQNGVGAISSVQVSEDSRKRGMAKSHAREPVPRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGRQGGYDKEEKAAKAYDLAALKYWGPTTHINFPLSTYEKELEEMKHMTRQEFVANLRRKSSGFSRGASVYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGTSAVTNFDISRYDVKRICSSSTLIAGDLAKRSPKEPSALVPAEDFNSSGSSSMPPLASQPAPPMAITDGGEHSDELSNMMWNASSDVQVQAQNESVNNNNNVTESSSSQQVSPSSNKDAALNPQSPIAFGVSGADYGHGYFTLDGPKYDDGNNENDHMSTNRLGNLGLVNQVPMFALWNE 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0369 573 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR BBM 5 505 - -
Aed2g0369 573 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 5 505 - -
Aed2g0369 573 MobiDBLite consensus disorder prediction 423 469 - -
Aed2g0369 573 SUPERFAMILY DNA-binding domain 342 403 IPR016177 GO:0003677
Aed2g0369 573 MobiDBLite consensus disorder prediction 216 231 - -
Aed2g0369 573 SMART rav1_2 343 407 IPR001471 GO:0003700|GO:0006355
Aed2g0369 573 SMART rav1_2 244 313 IPR001471 GO:0003700|GO:0006355
Aed2g0369 573 MobiDBLite consensus disorder prediction 210 231 - -
Aed2g0369 573 ProSiteProfiles AP2/ERF domain profile. 244 307 IPR001471 GO:0003700|GO:0006355
Aed2g0369 573 Pfam AP2 domain 342 393 IPR001471 GO:0003700|GO:0006355
Aed2g0369 573 Pfam AP2 domain 244 299 IPR001471 GO:0003700|GO:0006355
Aed2g0369 573 MobiDBLite consensus disorder prediction 490 519 - -
Aed2g0369 573 ProSiteProfiles AP2/ERF domain profile. 343 401 IPR001471 GO:0003700|GO:0006355
Aed2g0369 573 CDD AP2 342 403 IPR001471 GO:0003700|GO:0006355
Aed2g0369 573 MobiDBLite consensus disorder prediction 21 46 - -
Aed2g0369 573 Gene3D AP2/ERF domain 243 309 IPR036955 GO:0003700|GO:0006355
Aed2g0369 573 Gene3D AP2/ERF domain 343 403 IPR036955 GO:0003700|GO:0006355
Aed2g0369 573 PRINTS Ethylene responsive element binding protein signature 383 403 IPR001471 GO:0003700|GO:0006355
Aed2g0369 573 PRINTS Ethylene responsive element binding protein signature 245 256 IPR001471 GO:0003700|GO:0006355
Aed2g0369 573 SUPERFAMILY DNA-binding domain 243 309 IPR016177 GO:0003677
Aed2g0369 573 MobiDBLite consensus disorder prediction 490 515 - -
Aed2g0369 573 CDD AP2 243 309 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0369 Aed-Chr2 2526949 2531230 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0369 1 431 AP2-EREBP Transcription Factor Family AT1G72570 49.045 1.33e-133 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Aed2g0369 AP2 1.8e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0369 K09285 - gmx:100809762 987.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0369 2 2526949 2531230 Aed2g0369 2 2526949 2531230 ECH