Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0366 ATGGGAAGACGTCCCTGCTGCCCCAAAGAGATAAACAAAGGTGCTTGGTCGAGAGAAGAAGATGATACCCTCTCCAAATATGTTTCCATCCATGGAGAAGGAAAATGGCAGAAGGTTGCACAAAATGCAGGTTTAAAGCGATGTGGAAAAAGTTGTAGACAAAGATGGTTGAATTATCTGAAGCCCGGCATTAAGAGAGGTGACATCTCTGTTGATGAAGAGGATATGATTATAAGACTTCATCGTCTTCTTGGTAACAGATGGGCATTGATAGCAAAGAGGCTACCTGGACGAACGGACAATGAAATAAAGAACTATTGGAACACTAATCTGTCAAAGAAATTACAGAAGCCATCATCTGTTTCTTCAGTTCAACAACACAAAAAGGAGGAAAAAAAGAGTACCAAACAAGCTTTGCATGTATTAGCTCCACGGCCTAGTAGAGTTAATGAATACAGTAACTATAGGCATCCCTCAAATAAACTAGTAGAGGGTAGTAGTGATGATGATGAAGAAGCTAATAATTCTTTTAGTGATTTCCTGAACCAACAATTGTTGATTACTGATGATTCCAACAACAACAACAACAACAACAACAGTCCTCCTACCTCTTCATCAGAGAAATTTGACCCTGATCTTGAGACCCTTTTGGATGTGGAGCTTAAGAGGATGGCTTCCTTTCTTGGAGTTGAAAATGATTGA 702 0.396 MGRRPCCPKEINKGAWSREEDDTLSKYVSIHGEGKWQKVAQNAGLKRCGKSCRQRWLNYLKPGIKRGDISVDEEDMIIRLHRLLGNRWALIAKRLPGRTDNEIKNYWNTNLSKKLQKPSSVSSVQQHKKEEKKSTKQALHVLAPRPSRVNEYSNYRHPSNKLVEGSSDDDEEANNSFSDFLNQQLLITDDSNNNNNNNNSPPTSSSEKFDPDLETLLDVELKRMASFLGVEND 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0366 233 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Aed2g0366 233 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Aed2g0366 233 MobiDBLite consensus disorder prediction 124 138 - -
Aed2g0366 233 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 65 115 IPR017930 -
Aed2g0366 233 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Aed2g0366 233 MobiDBLite consensus disorder prediction 188 210 - -
Aed2g0366 233 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 1 223 - -
Aed2g0366 233 CDD SANT 15 60 IPR001005 -
Aed2g0366 233 Gene3D - 70 141 - -
Aed2g0366 233 SUPERFAMILY Homeodomain-like 11 107 IPR009057 -
Aed2g0366 233 SMART sant 12 62 IPR001005 -
Aed2g0366 233 SMART sant 65 113 IPR001005 -
Aed2g0366 233 PANTHER MYB TRANSCRIPTION FACTOR 1 223 - -
Aed2g0366 233 Gene3D - 7 66 - -
Aed2g0366 233 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 64 IPR017930 -
Aed2g0366 233 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Aed2g0366 233 CDD SANT 70 111 IPR001005 -
Aed2g0366 233 MobiDBLite consensus disorder prediction 114 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0366 Aed-Chr2 2509414 2510279 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0366 1 146 MYB Transcription Factor Family AT4G34990 50.641 5.62e-54 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aed2g0366 Myb_DNA-binding 1.7e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0366 K09422 - gmx:100101858 308.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0366 2 2509414 2510279 Aed2g0366 2 2509414 2510279 ECH