Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0355 ATGTTGACTTGCATAGCGTGTACCAAGCAACTCAACAACAATGGATCTCTTTGCCGAGAAGAAGAAGAGGAAGAAGCTGTTCACACACCCAGCACCAAGCAAGCCATCAAGGCTCTCACTGCTCAGATCAAGGAGATGGCAGTGAAGGCTTCTGGGGCATATAAGAACTGCAGGCCATGTTCAGGATCTTCAAATGGTAACAACAGGAATAGAAAGTATGCAGAGTCAGAAATGGGGTCAGATTCAGCAAGGTTCAACTGGGCCTACCGCAGAACTGGGAGCTCCAATTCAACCCCAAGGATGTGGGGAAAGGAAATGGAAGGTGGTAGGGTGAAAGGGCTTTCAAGTGGAGAAGGAACACCAGCATCAGTGAGTGGACGCACCGAGTCAGTGTTCATGGAGGAGGATGAGCCTAAGGAGTGGATTGCCCAAGTGGAGCCTGGTGTGCTTATTACTTTTGTTTCATTGCCTCAGGGAGGGAATGATCTCAAGCGGATACGCTTCAGTCGTGAAATGTTTAATAAATGGCAAGCTCAGAGGTGGTGGGCAGAGAATTATGACAAGGTCATGGAGTTGTACAATGTTCAAAGGTTCAATCAGCAAGCAGTTCCTCTTCCAACCCCACCTAGATCTGAAGATGAGAGCTCAAAGATTGAATCTGCTAGGGACAGTCCTGTCACTCCTCCACTCAGCAAAGAACGTGCACCGCGACATTTTCATCACCCAATGGGAATGGGATACTCCTCATCAGATTCATTGGATCGCCACCAAATGAAACCTCATCACCCTTGCTTTGAAACAAGTGGTCTGGCGTCAATGCCTACTAATCTTTCAAACATCAGTGCAGCACCAAAGACCGAAAGATCATCCGTTGATGCTTCTGTAAGGACCAGTTCATCTGGAGAAGATCACTCAGGCGAGTTTTCGATCAGCAATGCCAGTGATATGGAAACTGAATGGGTTGAACAGGATGAACCAGGAGTATACATCACTATCAGATCACTGCCAGGTGGAACCAGAGAACTCAGGCCCGAGAAAAATTTGGAGAAATGCATGCAAGATTGTGGTGGGAAGAGAACCGAGCAAGGATACAAGAACAATACTTGTGATGACTGTGACTATACAAGAGCCTTTACACAGACACAGCTGCTTCAGCAGGCTAACACAGTACAACTTGAAAGCCTTACAACAACAGTATTGCGTATTCTAGATCAAGTTACCTTCTTTCTGGTGGATAAATTGCATTTAACTGCAACTTTCAACTTTGTAATTGTAGTTCACTTTAGACGTGGAGAAAAAGCAGGTGTTGGGAAATATTAA 1320 0.4576 MLTCIACTKQLNNNGSLCREEEEEEAVHTPSTKQAIKALTAQIKEMAVKASGAYKNCRPCSGSSNGNNRNRKYAESEMGSDSARFNWAYRRTGSSNSTPRMWGKEMEGGRVKGLSSGEGTPASVSGRTESVFMEEDEPKEWIAQVEPGVLITFVSLPQGGNDLKRIRFSREMFNKWQAQRWWAENYDKVMELYNVQRFNQQAVPLPTPPRSEDESSKIESARDSPVTPPLSKERAPRHFHHPMGMGYSSSDSLDRHQMKPHHPCFETSGLASMPTNLSNISAAPKTERSSVDASVRTSSSGEDHSGEFSISNASDMETEWVEQDEPGVYITIRSLPGGTRELRPEKNLEKCMQDCGGKRTEQGYKNNTCDDCDYTRAFTQTQLLQQANTVQLESLTTTVLRILDQVTFFLVDKLHLTATFNFVIVVHFRRGEKAGVGKY 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0355 439 MobiDBLite consensus disorder prediction 269 317 - -
Aed2g0355 439 ProSiteProfiles BRX domain profile. 318 376 IPR013591 -
Aed2g0355 439 MobiDBLite consensus disorder prediction 93 132 - -
Aed2g0355 439 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 343 IPR044532 -
Aed2g0355 439 MobiDBLite consensus disorder prediction 202 318 - -
Aed2g0355 439 ProSiteProfiles BRX domain profile. 139 194 IPR013591 -
Aed2g0355 439 Pfam Transcription factor regulating root and shoot growth via Pin3 139 193 IPR013591 -
Aed2g0355 439 Pfam Transcription factor regulating root and shoot growth via Pin3 317 343 IPR013591 -
Aed2g0355 439 PANTHER PROTEIN BREVIS RADIX-LIKE 3 1 343 - -
Aed2g0355 439 Pfam Transcription factor BRX N-terminal domain 24 60 IPR027988 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0355 Aed-Chr2 2405581 2409640 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0355 1 343 Major Intrinsic Protein MIP AT1G31880 45.278 3.16e-81 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0355 - - gmx:100805480 610.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0355 2 2405581 2409640 Aed2g0355 2 2405581 2409640 ECH