Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0345 ATGTTCATCATGCAATCCCCGTCACATTCCCATGCAGTCGGAGGAGGTAATTCCACCGCCATTGCCATCAGCGGTGGCCGACATAGCAACGCTGCCGTCAAATGGGCCGTGGAGCACCTCCTAAAGAAGAACACCTCATGCATCCTTATTCATGTTCGTACCAAGACCATCCATCCCCATGATGTTGATGACGTACCTAAACATGGTCGTCCACCAACTGAAGAAGAATTGCACCAATTCTTTCTTCCCTTTCGAGGATTTTGTGCCAGAAAAGGGATCACAGCAAATGAATTGGTCCTGCATGACCTTGATGTTGCAAGTGCGCTTACTGATTACGTTGTTAAAAATTGTATCAGCACCGTTGTTGTTGGTGCTTTTACTTCCCCCTGGAACACTCTTTTAAGGAAATTTCATAAAGATGATGTGCCAACTAGCTTAGCAAAGTCTTTGCCAGATACTTGCACTTTATATGTTATATCAAAAGGAAAAGCACAACATATTCGACCAACAGGTCCTCATCATCAGCATATTAAAGTCACACCAGCTAGATCTATAAGAGACATAGTCACCCTCTTGCAAAATACTCCAATGGTTGATCCACATAAGAATCTTGCTGATACCCCTGCAGATTCTGAAGATACACACGGGAAACCAATCAAAGGTTCAATTGGGCGGCGACAGTCCAGCAAAGTTTGGGGATCTTTACAGGAAATGAAAGATTCTATGCTAACAACAACACATAAGTTCAATGAAGATACCGATTCACCAAGAGGTCCAGCAGAGTACGCCTTATCACAAGCTTCATCAGCTAGAACTTCTCCTGCAAACAGTGACAGCACAGGCCAACACCTTGGTCCTTCTTTGCTTGACAAGTCGCATGGAAATCATGAACTAGTTGTTAACTCAGACAAGCCTATGAACACCTCTTCTTCCAAACGCTCAGTAGACTTTGAGATAGAATTGAAGAAACTGAAACTAGAACTGCAAAAAACAACAGAGAAGTTTGGTATGGCTTGCAAAGAAGCTGCAACGGAGCTTGAAAAGTGTAGGCAAGAAAAGGAACGAAGTTTAGAGGAAGCTAGGCTTTCTGAAGAGACTGCATTGGCTTCGGCAGAGGTAGCGAGGCAGAAAACTAAAGTAGCTATGGAATCAGCAGAAATGTCACAACGCCTGGCTGAAACGGAAACCCAAAAGAGAAAGGAAGCCGAACTAAGAGCCAAGCATGAGGGAGAAGAAATGAATAAAGTATTGCATGAAGTTGTATGTAATAGTATACCATATAGAAGATATAAAATTGAAGAAATTGAAGCTGCAACAAATAAATTCGACATTACTTTGAAAATTGGTGAAGGTGGATATGGACCTGTTTTTAGAGGAGTCCTTGATCACACTGTTGTTGCCATTAAGGCCCTGAAACCAGACATAACCCATGGAGAGAGGCAATTTCAACAAGAGGTTATTGTGTTGAGCACCATAAGACATCCAAACATGGTGCTCCTCCTAGGAGCATGCCCAGAATTTGGATGTATTGTGTATGAGTACATGGAAAACGGAAGCTTAGAAGATCGTCTCTTCATGAAAGACAACACTCCACCAATTCCTTGGAAAACACGTTTCAAAATAGCATCAGATATTGCCACTGGCCTTCTTTTCCTTCACCAGACAAAGCCAGAACCCCTGGTGCACCGCGACCTGAAGCCGGCAAACATCCTCTTAGACAAGAACTACGTGAGCAAGATCAGTGACGTGGGTTTGGCGCGGCTTGTTCCCCCTTCTGTGGCCAACAAAACCACACAATATCGCTTGACAGGTGCAGCTGGAACATTTTGCTACATTGACCCTGAGTATCAACAAACAGGGTTGTTGGGTGTGAAATCAGACATATATTCATTAGGTGTGGTGCTGCTACAGATTATTACAGGAAAAACTCCAATGGGTTTGTCACACTTGGTTAGGAAGGCTATTCAAAACGACACTTTCAGTGAGGTGCTTGATCCAAGTGTCTCAGATTGGCCTGTGGAAGAGGCCTTCTCTTTTACTAACTTGGCCTTGAAGTGTTGTGAGTTGAGAAAACGTGATAGACCAGATCTTGATACTGTTGTTTTGCCTGAGCTTACTAGAATTTCAGGGATATGGAACTGTGAGGACACGCATTCTCCATAA 2163 0.4337 MFIMQSPSHSHAVGGGNSTAIAISGGRHSNAAVKWAVEHLLKKNTSCILIHVRTKTIHPHDVDDVPKHGRPPTEEELHQFFLPFRGFCARKGITANELVLHDLDVASALTDYVVKNCISTVVVGAFTSPWNTLLRKFHKDDVPTSLAKSLPDTCTLYVISKGKAQHIRPTGPHHQHIKVTPARSIRDIVTLLQNTPMVDPHKNLADTPADSEDTHGKPIKGSIGRRQSSKVWGSLQEMKDSMLTTTHKFNEDTDSPRGPAEYALSQASSARTSPANSDSTGQHLGPSLLDKSHGNHELVVNSDKPMNTSSSKRSVDFEIELKKLKLELQKTTEKFGMACKEAATELEKCRQEKERSLEEARLSEETALASAEVARQKTKVAMESAEMSQRLAETETQKRKEAELRAKHEGEEMNKVLHEVVCNSIPYRRYKIEEIEAATNKFDITLKIGEGGYGPVFRGVLDHTVVAIKALKPDITHGERQFQQEVIVLSTIRHPNMVLLLGACPEFGCIVYEYMENGSLEDRLFMKDNTPPIPWKTRFKIASDIATGLLFLHQTKPEPLVHRDLKPANILLDKNYVSKISDVGLARLVPPSVANKTTQYRLTGAAGTFCYIDPEYQQTGLLGVKSDIYSLGVVLLQIITGKTPMGLSHLVRKAIQNDTFSEVLDPSVSDWPVEEAFSFTNLALKCCELRKRDRPDLDTVVLPELTRISGIWNCEDTHSP 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0345 720 Gene3D Transferase(Phosphotransferase) domain 1 515 711 - -
Aed2g0345 720 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 18 710 - -
Aed2g0345 720 Coils Coil 339 366 - -
Aed2g0345 720 ProSiteProfiles Protein kinase domain profile. 442 705 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g0345 720 CDD STK_N 18 162 - -
Aed2g0345 720 SMART serkin_6 442 706 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g0345 720 Gene3D Phosphorylase Kinase; domain 1 420 514 - -
Aed2g0345 720 PANTHER OS02G0152300 PROTEIN 18 710 - -
Aed2g0345 720 Gene3D HUPs 18 138 IPR014729 -
Aed2g0345 720 MobiDBLite consensus disorder prediction 265 286 - -
Aed2g0345 720 ProSitePatterns Serine/Threonine protein kinases active-site signature. 560 572 IPR008271 GO:0004672|GO:0006468
Aed2g0345 720 MobiDBLite consensus disorder prediction 196 231 - -
Aed2g0345 720 Coils Coil 314 334 - -
Aed2g0345 720 MobiDBLite consensus disorder prediction 205 220 - -
Aed2g0345 720 MobiDBLite consensus disorder prediction 248 293 - -
Aed2g0345 720 Pfam Protein tyrosine and serine/threonine kinase 445 701 IPR001245 GO:0004672|GO:0006468
Aed2g0345 720 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 21 127 - -
Aed2g0345 720 SUPERFAMILY Protein kinase-like (PK-like) 423 701 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0345 Aed-Chr2 2303669 2307081 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0345 15 711 Receptor kinase-like Gene Family AT1G78940 45.845 0.0 581
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Aed2g0345 PK_Tyr_Ser-Thr 3e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0345 - - gmx:100799611 1160.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0345 2 2303669 2307081 Aed2g0345 2 2303669 2307081 ECH
Aed2g0345 2 2303669 2307081 Aed1g1336 1 12454550 12457209 PCT