Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0332 ATGGAACCTCGAGTTGGGAACAAGTTCCGTCTCGGCAGGAAAATTGGTAGCGGATCTTTCGGAGAGATCTATCTCGGAACTAATATTCAGACAAATGAAGAGGTTGCGATTAAGCTTGAAAGTGTCAAAACCAAGCATCCTCAATTGTTGTATGAATCGAAGCTGTACAAAATACTGCAAGGAGGAAATGGGATTCCAAATGTGAAATGGTATGGTGTTGAAGGAGAGTACAATGTGCTCGTGATGGATTTACTTGGCCCTAGTCTTGAGGATTTATTCAACTTCTGTAGTCGGAAATTGTCTCTCAAAACTGTTCTTATGCTTGCTGATCAGATGCTAAATCGAGTTGAGTTTGTTCATTCCAAATCATTTTTACATCGCGACATCAAGCCGGACAACTTCCTCATGGGTTTAGGGAGGCGTGCAAATCAAGTGTATGTCATTGACTTTGGCCTTGCTAAGAAATATAGAGACACCACTACACATCAGCATATTCCTTACAGAGAGAACAAGAATTTGACAGGAACTGCTAGGTATGCTAGTATGAATACTCATCTAGGAATTGAGCAAAGCCGTAGGGATGATTTAGAGTCGCTTGGATATGTTCTAATGTACTTTTTAAGAGGAAGTCTGCCTTGGCAGGGATTGAAAGCTGGTACTAAGAAGCAGAAGTATGAGAAGATTAGTGAGAAGAAAGTTTCTACTTCTATTGAGTCTCTCTGTCGTGGCTATCCCTCAGAATTTGCTTCATACTTCCATTACTGCCGGTCACTGAGGTTCGATGATAAACCAGATTATGCTTATTTGAAAAGACTTCTCCGTGACCTTTTCATTCGTGAAGGATTCCAGTTTGATTATGTCTTTGATTGGACCATTTTGAAATATCAGCAATCTTCAAGTGCCACTGCCCCTGCCCGTGCTATTGGTCCTGCTGCTGGACCAAGTTCAGGTATGCCACCACTGGGCGCAAATGCTGATGGACAATTAGTGTTAGGTGGGGAGGATGGTAGGCCTACTAACTGGTCCTCATCAGATCCTACTCGTAGGAGAAACTCTGGGCCTATTGCTAATGATGGAATCTTATCTAGACAAAAAGGCCCGGTTACATATGACTCAACTGGATCTAAAGATGCTATGTTGTCAAGCTCTAATTTCCTCCGGTCAAGTGGAACTGCAAGGCGAGGTGCTGTCTCAGGCAACCGTGATGTAGTTGGCAGTGAGACTGAGGCCTCTCGTTCTCTGACCCTGGATTCAAGTCAGGGAGCACTTCGTAGGATCTCTGCTCCTGGTACTCAGAGAAGTTCAGCTATATTGTCATCTGAGCACAACCGAACATCCTCTGGCAGAAACACATCCAACATAAAGAATTTGGAGACAACTCTTAGGGGTATTGAGAGCCTGCATTTCAACGACGAGAGGGTACATTATTAG 1431 0.4354 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLESVKTKHPQLLYESKLYKILQGGNGIPNVKWYGVEGEYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMLNRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYVIDFGLAKKYRDTTTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIESLCRGYPSEFASYFHYCRSLRFDDKPDYAYLKRLLRDLFIREGFQFDYVFDWTILKYQQSSSATAPARAIGPAAGPSSGMPPLGANADGQLVLGGEDGRPTNWSSSDPTRRRNSGPIANDGILSRQKGPVTYDSTGSKDAMLSSSNFLRSSGTARRGAVSGNRDVVGSETEASRSLTLDSSQGALRRISAPGTQRSSAILSSEHNRTSSGRNTSNIKNLETTLRGIESLHFNDERVHY 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0332 476 MobiDBLite consensus disorder prediction 388 452 - -
Aed2g0332 476 PANTHER CASEIN KINASE 1-LIKE PROTEIN 2 1 461 IPR030509 GO:0004672|GO:0005524
Aed2g0332 476 MobiDBLite consensus disorder prediction 305 376 - -
Aed2g0332 476 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g0332 476 MobiDBLite consensus disorder prediction 337 351 - -
Aed2g0332 476 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Aed2g0332 476 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Aed2g0332 476 Gene3D Transferase(Phosphotransferase) domain 1 1 309 - -
Aed2g0332 476 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g0332 476 PANTHER CASEIN KINASE-RELATED 1 461 - -
Aed2g0332 476 MobiDBLite consensus disorder prediction 404 452 - -
Aed2g0332 476 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g0332 476 CDD STKc_CK1_delta_epsilon 8 282 - -
Aed2g0332 476 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0332 Aed-Chr2 2195408 2200355 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0332 7 223 EF-hand Containing Proteins AT2G17890 26.222 8.77e-13 68.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Aed2g0332 Pkinase 6.1e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0332 K02218 - gmx:100819017 884.019