Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0331 ATGGCAAAGGGAAGAATAAGGGCGAGGATCCGGAGGAGCAATCTTTACACATTTGGTTGCCTTAAGCCTTCTACCACTGAGGAGGCACCTCATCCACTTCACGGTCCCGGGTTCTCACGTACGGTGTATTGCAACCAGCCTCTATTTCATGACAAGAAGCCTCTAATTTACTGCAAGAATGATATATCCACGACCAAGTACAATGTTATTACGTTTTTCCCCAAGGCACTCTTTGAACAATTTCGCAGGGTTGCTAATATATACTTCCTTTTGGCTGCGTGCCTCTCAGCCTCTCCAATTTCGCCTTTCAGCGCACTGAGCATGATTGCTCCTTTGGCATTTGTTGTGGGGCTTAGTATGGCGAAGGAAGCATTGGAAGATTCGCGCAGGTTTCTTCAGGATGTCAAAGTTAATCGTCGGAAGGTTAATCGCCATAAAGGTGATGGTGTTTTTGGTCCCAAGTCATGGCAGAACATTATGGTTGGGGATGTGCTAAAAGTGAAAAAAGATCAATTTTTCCCAGCTGATTTGCTTCTCTTGTCATCAAGTTATGAGGATGGGATATGCTATGTGGAGACTATGAATTTAGATGGTGAGACAAACTTGAAGGTGAAAAGATCTTTGGAGGCTACCATGGCTCTAGATAACGATGATGTTTTTAAAGATTTCGCTGGAACAATACGTTGTGAAGACCCAAACCCCAATCTTTATACTTTTGTTGGAAACTTTGAGTATGAGCGCCAGATTTATCCTCTTGATCCTAGTCAAATTCTTCTCCGAGATTCTAAGCTCAGGAACACTGATTACATCTATGGGGTGGCCGTTTTCACTGGTCATGACAGCAAAGTCATGCAAAATTCCACAAAATCCCCTTCAAAAAGGAGCACGATAGAAAAGAAGATGGATTATATCATATACACCCTCTTCACTGTCCTCATTTTGATATCTCTTATTAGTTCCATAGGATTTATCATCAAGACTAAGTTCCAAACACCAAACTGGTGGTACATACGGCCTGACAATATTGAATACCAGTATGATCCCCACAAAGTTGGAGTGGCTGGAATGAGTCATCTGATTACTGCGCTCATTCTTTATGGATATTTGATACCCATCTCACTTTATGTTTCCATTGAGCTTGTAAAGGTTTTACAGGCAACCTTCATTAACCAAGACATTCAAATGTATGATGAAGAAACTGGGACTCCAGCTGATGCACGGACATCGAATTTGAATGAAGAATTGGGTCAGGTAGATACTATCCTGTCAGATAAAACTGGAACTTTGACCTGTAATCAGATGGACTTTTTGAAGTGCTCCATTGCCGGTACTGCATATGGTGTGCGCTCCAGTGAAGTTGAAATTGCTGCAGCAAAGCAGATGGCTTCTGATGTTGAGGACCAGGATTCAGATCTCTCCAGTTTCCCCGTGTCTAAGACTAAAGGGCGAGTTTCATGGGATGATGTTAGAAGAGCTGAAGAAATTGAACTGGAGACTGTTGTTACTTCTAAAGGAGATGAGGATCAAAGGCATGGCATAAAGGGATTTGGTTTTGAAGACGACCGCATCATGAATTGTAATTGGTTGAAAGAGCCCAATGCTGATGACCTTTTGATGTTCTTCCGAATATTAGCAGTTTGTCACACTGCCATTCCTGAGCTGAATGAGGAGACTGGCATTTATGCATATGAAGCTGAGTCACCTGATGAAGGGGCTTTTCTTGTAGCAGCAAGAGAATTTGGCTTTGAGTTTTGCAGAAGGACTCAATCAAGTATTTTCGTACATGAAAGATTTTCATCTTCTGGCCAAGTGGTTGAAAGAGAGTACAAACTGTTGAATCTGCTGGATTTCACTAGTAAAAGAAAGCGTATGTCTGTGATTGTGCGTGATGAGGAGGGCAGTATTTTTCTTATGTGCAAGGGGGCTGACAGTATCATATTTGATCGAATGTCGAAGAATGGAAAAATGTATTTGGAGGCTACTACCAGACATCTAAATGAATATGGAGAAGCTGGTTTGAGAACACTAGCCCTGGCTTATAGAAAGCTTGATGAGCAAGAATACACTGCTTGGAACAATGAATTTCAGAAAGCCAAAGCAGCTGTTGGGGCTGACAGAGATTCAATGCTTGAGCGGGTATCAGATATGATGGAAAAAGAGTTGATTCTTGTTGGGGCTACTGCTGTGGAAGACAAACTGCAGAAAGGGGTTGGCTTGTCATTCTTTATAGTGCCCCAATGTATTGATAATCTTGCTCAAGCTGGTCTCAAGATCTGGGTGTTGACAGGGGATAAGATGGAAACTGCTATCAACATTGGTTTGCTTCGACAAGGCATGAAGCAGATCTGTATAACTACTCCGGTTATAGATTCTGTAGCAACTGATGTCAAACAGGCCATCAAGGACAACATTTCAAATCAAATCACCAATGGTTCCCAAATGATAAAACTGGAGAAGGATCCTCATGCTGCATTTGCTTTAATTATTGATGGGAAAACTCTGACATATGCTTTAGAAGATGATATGAAGCTCCAATTTTTGGGATTGGCTGTTGATTGTGCATCTGTCATCTGCTGTCGTGTGTCTCCCAGGCAAAAGGCATTGTTTCCTGCACTTTATCAACAAGGACCCAAGAATTTGTTCTTTGACTGGTATAGAATATTGGGATGGATGGGCAATGGTCTCTATTCCTCCCTCATCATATTCTTCCTCATCATAACCATCTTCTTCAACCAAGCATTCCGTGCTGATGGCCAGGTAGCTGACATGGCTGCTGTTGGGACCACTATGTTCACTTGCATCATCTGGACTGTCAACTGTCAGATTGCACTTACAATGAGCCACTTTACATGGATTCAGCACCTGCTTGTATGGGGCAGCATAGCCTCTTGGTACATCTTTCTGTGCTTGTATGGAATGCTTTCTCCAGAATATTCCATGAGTGCGTACCAAATACTGGTTGAAGCTCTTGGTCCTGCGCCCATTTATTGGGCAGCAACCCTTTTAGTTACAGTTACTTGCAATCTTCCTTATTTTGTCCACATATCCTTCCAAAGATGTTTCCATCCCATGGATCATCACATTATCCAAGAAATCAAGTACTACAAAAAGGATATTGAAGATCAACACATGTGGAAAAGGGAGTCTTCTAAAGCAAGACAGGAAACCAAGATTGGTTTCACAGCAAGAGTGGAAGCAAAGATCAGACAACTGAAGGGAAGGCTGCAGAAGAAGCAATCTACCTTGTCTATTTCGGCTCCATCGTGA 3267 0.4224 MAKGRIRARIRRSNLYTFGCLKPSTTEEAPHPLHGPGFSRTVYCNQPLFHDKKPLIYCKNDISTTKYNVITFFPKALFEQFRRVANIYFLLAACLSASPISPFSALSMIAPLAFVVGLSMAKEALEDSRRFLQDVKVNRRKVNRHKGDGVFGPKSWQNIMVGDVLKVKKDQFFPADLLLLSSSYEDGICYVETMNLDGETNLKVKRSLEATMALDNDDVFKDFAGTIRCEDPNPNLYTFVGNFEYERQIYPLDPSQILLRDSKLRNTDYIYGVAVFTGHDSKVMQNSTKSPSKRSTIEKKMDYIIYTLFTVLILISLISSIGFIIKTKFQTPNWWYIRPDNIEYQYDPHKVGVAGMSHLITALILYGYLIPISLYVSIELVKVLQATFINQDIQMYDEETGTPADARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGTAYGVRSSEVEIAAAKQMASDVEDQDSDLSSFPVSKTKGRVSWDDVRRAEEIELETVVTSKGDEDQRHGIKGFGFEDDRIMNCNWLKEPNADDLLMFFRILAVCHTAIPELNEETGIYAYEAESPDEGAFLVAAREFGFEFCRRTQSSIFVHERFSSSGQVVEREYKLLNLLDFTSKRKRMSVIVRDEEGSIFLMCKGADSIIFDRMSKNGKMYLEATTRHLNEYGEAGLRTLALAYRKLDEQEYTAWNNEFQKAKAAVGADRDSMLERVSDMMEKELILVGATAVEDKLQKGVGLSFFIVPQCIDNLAQAGLKIWVLTGDKMETAINIGLLRQGMKQICITTPVIDSVATDVKQAIKDNISNQITNGSQMIKLEKDPHAAFALIIDGKTLTYALEDDMKLQFLGLAVDCASVICCRVSPRQKALFPALYQQGPKNLFFDWYRILGWMGNGLYSSLIIFFLIITIFFNQAFRADGQVADMAAVGTTMFTCIIWTVNCQIALTMSHFTWIQHLLVWGSIASWYIFLCLYGMLSPEYSMSAYQILVEALGPAPIYWAATLLVTVTCNLPYFVHISFQRCFHPMDHHIIQEIKYYKKDIEDQHMWKRESSKARQETKIGFTARVEAKIRQLKGRLQKKQSTLSISAPS 1088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0331 1088 ProSitePatterns E1-E2 ATPases phosphorylation site. 424 430 IPR018303 -
Aed2g0331 1088 Gene3D - 432 458 IPR023299 GO:0000166
Aed2g0331 1088 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 868 - -
Aed2g0331 1088 Pfam Phospholipid-translocating ATPase N-terminal 42 109 IPR032631 -
Aed2g0331 1088 Pfam Cation transport ATPase (P-type) 547 651 - -
Aed2g0331 1088 CDD P-type_ATPase_APLT_Dnf-like 60 868 - -
Aed2g0331 1088 Gene3D - 586 701 IPR023299 GO:0000166
Aed2g0331 1088 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 57 867 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Aed2g0331 1088 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 868 - -
Aed2g0331 1088 Coils Coil 1061 1081 - -
Aed2g0331 1088 Pfam Phospholipid-translocating P-type ATPase C-terminal 859 1023 IPR032630 -
Aed2g0331 1088 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 869 1086 - -
Aed2g0331 1088 SUPERFAMILY Calcium ATPase, transmembrane domain M 56 1022 IPR023298 -
Aed2g0331 1088 SUPERFAMILY HAD-like 410 781 IPR036412 -
Aed2g0331 1088 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 523 686 IPR023299 GO:0000166
Aed2g0331 1088 Coils Coil 448 468 - -
Aed2g0331 1088 SUPERFAMILY Calcium ATPase, transduction domain A 147 286 IPR008250 -
Aed2g0331 1088 Gene3D - 419 431 IPR023214 -
Aed2g0331 1088 Gene3D - 720 895 IPR023214 -
Aed2g0331 1088 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 869 1086 - -
Aed2g0331 1088 Gene3D - 113 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0331 Aed-Chr2 2186972 2194667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0331 1 876 Primary Pumps ATPases AT1G17500 71.623 0.0 1299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0331 K01530 - gmx:100819559 1612.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1347 1 12525934 12531163 Aed2g0331 2 2186972 2194667 PCT