Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0327 ATTGATGAACTTAAGAGTATTTCTGATTTCTGTGTTACTGGATATGCAGGGGATTTCTCATGGACTTGTCTGAGAGATTTTGATCTCACTTCTCTGTGCTTCCAAACGAGCTTAATAGACATTTTAAAGCTACTTTTTATCAGTGTCTTCTACATGTCTTTGCTTATTTCTTTAATCAGAAGACGTTCTGCATGTGTTAGCAACAGAAAGAACTGGCTTTTCCTAGTTGTCTCAGTTTGTTGTGCTCTCATTAGCATTGCACATTTCAGCAATGGCTTGAAGTTGCGGAATCAACAGAGCTGGTTAGCTTCTATTTTCAGAGCATTTGTGTGGCTTTCTTTCACAGTTTCATTGCATGTTCAGAGAAACAAATGGATCACAATTCTGAACTCTATCTGGTGGACATCTTCCTGTGTATTGGCTTCAGCTCTCAACATTGAAATTATCTTCAAAGAGCATGCAGTTGAACTTTTCGAACTTCTACAATGGCTTGTACATTTCTTACTTCTCTTTTGTGCCTTCCAAAATCTCTGTTATTTTGTCACATCCCAAAGTAACCAAGAAGCTACTACAAGTTTATCCGAGCCTCTGATAGCTCAGAGAGTTGAAACCAAACAAACACAACTAGGCCATGCTACCCTTCTCAGTAAATTGACTTTCTCTTGGGTTAATTCTTTACTCAGACAGGGTTACTCAAAGCCACTAGCTCTTAAAGAAATCCCATTTCTTCTTCCTGAAGATGAAGCGAACTCGGCCTACCAAGACTTCGTTCAAGCATGGGAATCCCTTGTAAGGGAGAACAGCAACAACAACAACAAAAACTTGGTTCTTTGGTCTGTAGTAAGAACTTTCTCAAAGGAGAATATATTAATAGGATTTTACGCATTACTCAGAAGTATCTGCATGATAATTTCTCCTCTAATACTCTATGCTTTTGTAAACTACTCAAATAGCACCGAGGCAGATCTCAAAGAAGGTTTTTCCATACTTGGTTTTATGATTCTCAGCAAAGTTGTTGAGTCTCTATGCCAGAGACATTACGGTTTTGGCTCAAGGAGATCAGGAATGAAGATTAGATCAGCTCTGATGGTGGCAGTGTATCAGAAACTGCTAAAGCTTTCAAGCTCAGCAAGGAGAAGGCACTCATCTGGAGAAGTTGTGAATTACATCGCGGTTGACGCGTATCGATTGGGAGAATTTCCATGGTGGTTTCATGTAACATGGACTTCTGCAGTGCAACTTGTTTTGTCCATTGTTCTCCTTTTCAGTGTTGTGGGTGCTGGTGCTCTTCCAGGTTTAGTCCCTCTTCTCATCTGTGGACTTCTCAATGTACCATTTGCAAAGATCATACAAAATTCTCAGTCACAATTCATGAAGGCACAAGATGAGCGTCTCAGATCAACTTCAGAAATTCTGAATAGTATGAAAATCATCAAGTTACAATCCTGGGAGGATAAATTCAAGAACTTGGTTTTGTCCCTACGTGCTAAGGAATTCATATGGTTGTCTAAGGCACAGATCATAAAAGCTTATGGGTCGTTTCTGTATTGGATGACTCCTACCATCGTTCCTGCTATTGTTTTCCTTGGATGTTCTATTTTCAATAGTGCCCCATTGAATGCTGGAACCATCTTCACAGTTCTTACAACATTGAGGATAATGGGAGAACCTGTTCGGTTGATCCCAGAAGCTCTATCTATTATGATCCAAGTTAAGGTCTCCTTTGATCGTCTCAATACCTTTTTGCTTGATGAAGAGTTAGATAGTATTAATGGTTATGGAAGTAGTAATATAAAGCAAAGTTCAGTTAGTGCAGTAGAAATCCAAGCTGGCAATTTCATTTGGGATCATGAATCAGTGTCCCCAACTTTAAGAGATGTGAATTTAGAAATCAAATGGGGACAGAAAATTGTAGTTTGTGGGCCAGTTGGAGTAGGAAAATCATCTCTTTTGTATGCAGTACTTGGAGAGATTCCCAAGATCTCAGGAACTGTTAATGTTGGTGGCACAATAGCCTATGTTTCTCAAACTTCTTGGATACAAAGTGGGACAGTTCGAGATAATATACTCTTCGGAAAGCCAATGGACAAAACCAGATATGAGAATGCTACTAAAGTTTGTGCCTTAGATATGGATATCAATGATTTTAGCCATGGTGATCTTACTGAAATAGGCCAGCGAGGGATTAACATGAGTGGAGGACAGAGGCAAAGGATTCAACTAGCTCGAGCAGTTTACAACGATGCTGACATCTATCTCCTTGATGACCCATTTAGTGCAGTTGATGCACACACTGCTTCTATTCTGTTCAATGTTAGAAAATATCACGGTTATGACTGTGTCATGACTGCTCTAAGAGAGAAAACAGTCATTCTAGTGACTCATCAAGTGGAGTTTCTCACAAAAGTTGATATGATCCTGGTAATGGAGGGCGGAAAAGTTATTCAATCAGGTAGTTATGAAGATCTCCTAACAGCTGGAAGTGCCTTAGAACAACTTGTGAGTGCCCATAAAGCTACATTAACAGGAGTGGATCAAAAAAATGAAAATGAAAGAGATTCTGATATTGAGGTTATGGAACATCCAGAAGAGTCTCAAAGTGAGGGGGTGATTTCTACCAAAGGTCAACTTGGGGCACAGCTTACACAAGAAGAAGAAAAAGAGATTGGTGATGTTGGGTGGAAGTCATTCTGGGATTATATTTCATTTTCCAGGGGATCATTCTTGATGTGTTTAACCATGTTAGCACAATTTTTTTTTATTGCTTTGCAGACTGCATCAACCTATTGGCTTGCTCTAGCCATTGAAATTCCAAAAGTAACTAGTGCCGTTTTTGTTGGAGTTTACTCATTATTTTCTATACTTAGTGTTGTATTTATATATATAAGGTCTGTCTTGGCTGCTAATCTTGGATTAAAAGCTTCTAAAGCCTTCTTCTCAAGTTTCACTTCGGCTATCTTCAATGCTCCTATGTTTTTCTTTGACTCAACCCCTGTTGGAAGGATTTTAACCCGAGCTTCATCAGATTTGAGTATTTTGGACCTTGATATTCCTTATACTCTCTCATTAGTAGCATTTGTAGTAGCTGAAATTCTGGTCACAATATGTGCAATGGTTTCAGTCACATGGCAAGTTCTTATTGTTGCTATTCCTGCTACCGTGGCATCAATATATATTCAGAGATATTATCAAGCCTCTGCAAGGGAATTGATAAGGATTAATGGAACCACAAAAGCTCCAGTCATGAATTTTGCTGCTGAGACATCACTTGGGGTGGTTACTGTGAGAGCATTCAACATGGTGAACAGATTTTTCAACAACTACCTAAAGCTTGTGGACAAGGATGCGACACTGTTCTTTCATTCTAACGTGACCATGCAATGGTCACTTTTAAGGATTGAAGTACTTCAAAATTTGATAGTCTTCACTGCAGCTTTATTACTTATTCTACTTCCCAAGGGATATGTACCTTCAGGTCTTGTGGGATTGTCTCTTTCTTATGCGTTCACATTGAAAGAATCCCAAGTATTTTGGAGTCTAATGTTTAGCATGTCATCAAACCATATCATCTCTGTTGAAAGAATAAAGCAATTCATTGACATACCAGCAGAGCCTCCTGCCATTGTGGAGGATAGTAGACCTCCATCTTCATGGCCTTCCAAGGGTAGGATTGATCTTCGAGCTCTAGAGATTAGATATCGTCCAAATGCTCCATTAGTCCTTAAGGGTATAAATTGTACATTTAAAGAAGGGAATAGAGTGGGAGTTGTAGGAAGGACTGGAAGTGGAAAAACTACACTTATAAGTGCTTTGTTTCGCTTAGTTGAACCTTCAACTGGTGATATACTCATAGATGGGATTAACATATGCTCAATCGGGTTAAAAGATTTGAGAATGAAACTCAGCATCATCCCTCAAGAACCAACTCTTTTCAAGGGCAGCATTAGGACCAACTTGGACCCTCTAGGCCTCTACGACGATGACAAAATGTGGAAGGCTTTAGAGAAATGTCAACTGAAGGAAACAATCAGCAAGCTACCAGGTCTCTTGGACTCTTCTGTGAGTGATGAAGGTGGAAATTGGAGCTTGGGACAACGGCAACTGTTTTGTCTTGGAAGAGTACTACTTAAGAGGAACAGAATACTTGTTCTAGATGAAGCTACTGCGTCCATTGACTCTACAACAGATGTCATTCTACAACAAGTGATTAGACGAGAATTTGCAGAATGCACGGTTGTAACAGTGGCTCACAGAGTTCCAACTGTAATAGATAGTGACATGGTCATGGTCCTGTCTTATGGGAAACTAGTGGAATATGATGACCCTTCAAAACTTATGGGGACCAAATCCTGGTTCTCTAAGTTGGTCACTGAATATTGGTCGAGCTGCAAGAAGAACTCCTCCCCAAATATTAGCAGGCAGCAACATTGA 4431 0.3961 IDELKSISDFCVTGYAGDFSWTCLRDFDLTSLCFQTSLIDILKLLFISVFYMSLLISLIRRRSACVSNRKNWLFLVVSVCCALISIAHFSNGLKLRNQQSWLASIFRAFVWLSFTVSLHVQRNKWITILNSIWWTSSCVLASALNIEIIFKEHAVELFELLQWLVHFLLLFCAFQNLCYFVTSQSNQEATTSLSEPLIAQRVETKQTQLGHATLLSKLTFSWVNSLLRQGYSKPLALKEIPFLLPEDEANSAYQDFVQAWESLVRENSNNNNKNLVLWSVVRTFSKENILIGFYALLRSICMIISPLILYAFVNYSNSTEADLKEGFSILGFMILSKVVESLCQRHYGFGSRRSGMKIRSALMVAVYQKLLKLSSSARRRHSSGEVVNYIAVDAYRLGEFPWWFHVTWTSAVQLVLSIVLLFSVVGAGALPGLVPLLICGLLNVPFAKIIQNSQSQFMKAQDERLRSTSEILNSMKIIKLQSWEDKFKNLVLSLRAKEFIWLSKAQIIKAYGSFLYWMTPTIVPAIVFLGCSIFNSAPLNAGTIFTVLTTLRIMGEPVRLIPEALSIMIQVKVSFDRLNTFLLDEELDSINGYGSSNIKQSSVSAVEIQAGNFIWDHESVSPTLRDVNLEIKWGQKIVVCGPVGVGKSSLLYAVLGEIPKISGTVNVGGTIAYVSQTSWIQSGTVRDNILFGKPMDKTRYENATKVCALDMDINDFSHGDLTEIGQRGINMSGGQRQRIQLARAVYNDADIYLLDDPFSAVDAHTASILFNVRKYHGYDCVMTALREKTVILVTHQVEFLTKVDMILVMEGGKVIQSGSYEDLLTAGSALEQLVSAHKATLTGVDQKNENERDSDIEVMEHPEESQSEGVISTKGQLGAQLTQEEEKEIGDVGWKSFWDYISFSRGSFLMCLTMLAQFFFIALQTASTYWLALAIEIPKVTSAVFVGVYSLFSILSVVFIYIRSVLAANLGLKASKAFFSSFTSAIFNAPMFFFDSTPVGRILTRASSDLSILDLDIPYTLSLVAFVVAEILVTICAMVSVTWQVLIVAIPATVASIYIQRYYQASARELIRINGTTKAPVMNFAAETSLGVVTVRAFNMVNRFFNNYLKLVDKDATLFFHSNVTMQWSLLRIEVLQNLIVFTAALLLILLPKGYVPSGLVGLSLSYAFTLKESQVFWSLMFSMSSNHIISVERIKQFIDIPAEPPAIVEDSRPPSSWPSKGRIDLRALEIRYRPNAPLVLKGINCTFKEGNRVGVVGRTGSGKTTLISALFRLVEPSTGDILIDGINICSIGLKDLRMKLSIIPQEPTLFKGSIRTNLDPLGLYDDDKMWKALEKCQLKETISKLPGLLDSSVSDEGGNWSLGQRQLFCLGRVLLKRNRILVLDEATASIDSTTDVILQQVIRREFAECTVVTVAHRVPTVIDSDMVMVLSYGKLVEYDDPSKLMGTKSWFSKLVTEYWSSCKKNSSPNISRQQH 1476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0327 1476 Pfam ABC transporter transmembrane region 289 554 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed2g0327 1476 Pfam ABC transporter transmembrane region 912 1160 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed2g0327 1476 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1226 1458 IPR003439 GO:0005524
Aed2g0327 1476 Pfam ABC transporter 624 758 IPR003439 GO:0005524
Aed2g0327 1476 CDD ABCC_MRP_domain1 606 813 - -
Aed2g0327 1476 SMART AAA_5 633 821 IPR003593 -
Aed2g0327 1476 SMART AAA_5 1250 1443 IPR003593 -
Aed2g0327 1476 Pfam ABC transporter 1241 1389 IPR003439 GO:0005524
Aed2g0327 1476 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 99 1469 - -
Aed2g0327 1476 Gene3D - 1207 1457 IPR027417 -
Aed2g0327 1476 ProSitePatterns ABC transporters family signature. 731 745 IPR017871 GO:0005524
Aed2g0327 1476 Gene3D ABC transporter type 1, transmembrane domain 265 583 IPR036640 GO:0005524|GO:0016021
Aed2g0327 1476 Gene3D ABC transporter type 1, transmembrane domain 874 1205 IPR036640 GO:0005524|GO:0016021
Aed2g0327 1476 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 912 1171 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed2g0327 1476 CDD ABCC_MRP_domain2 1222 1442 - -
Aed2g0327 1476 CDD ABC_6TM_ABCC_D1 290 578 IPR044746 GO:0140359
Aed2g0327 1476 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 606 834 IPR027417 -
Aed2g0327 1476 SUPERFAMILY ABC transporter transmembrane region 897 1206 IPR036640 GO:0005524|GO:0016021
Aed2g0327 1476 SUPERFAMILY ABC transporter transmembrane region 277 578 IPR036640 GO:0005524|GO:0016021
Aed2g0327 1476 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1214 1457 IPR027417 -
Aed2g0327 1476 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 289 570 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed2g0327 1476 PANTHER NHPM BACTERIOCIN SYSTEM ABC TRANSPORTER, PEPTIDASE/ATP-BINDING PROTEIN-RELATED 99 1469 - -
Aed2g0327 1476 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 608 836 IPR003439 GO:0005524
Aed2g0327 1476 Gene3D - 584 860 IPR027417 -
Aed2g0327 1476 CDD ABC_6TM_ABCC_D2 906 1199 IPR044726 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0327 Aed-Chr2 2139033 2144831 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0327 586 827 Calmodulin-binding Proteins AT2G36910 26.953 3.50e-20 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0327 - - gmx:100804798 2570.42