Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0322 ATGGGTGGCTCAGGAAGATGGCTTAAGTCGCTCATTTCTCTCAGAAGACCCTCCCCAACTGATCAAGAGAAGGGTGGTGATAAGAGTAAGAGAAAGTGGAAGTTATGGAAGAGCACTTCAGAAGGGTTTGGGATTGGATCATCAATGCAGAAGGGACAGGGTGGTGGTGGTGGTGGTTCCTTTGTGGTGGATGATGGAGCATTTGCTGCTGCTTTAGCTGCTGTGGTGAGAACTCCTCTCAAAGACTTCATGGTCATCAAGCAGGAATGGGCTGCCATTCGAATCCAGGCTGTGTTTCGAGGTTTCTTGGCAAGACAAGCTTTGAGGGCCCTGAAGGCAGTGGTGAGGTTGCAAGCCATATTTCGTGGTTGGCAAGTGAGAAAGCAAGCAGCTGTTACTCTAAGGTGCATGCAGGCTCTTGTGCGAGTTCAAGCACGTGTCAAGGCAAGGAATGTGGGGAACCCTCAGGTAGGGAAATCTGTGAGTGGGCGATGCAACGAAGCTGATCCTGTTAAGCAAGCTGAGCAAAATTTGCCATGTTATTGTCAGCAAGGGTGGTGTGACATTCCAGGAACTGAGGAAGAAGTTAAGGCAAAATTACAAATGAGGCAGGAAGGAGCAATTAAGAAGGATAGAACAAAGGCATACTCTCAGTCTAAGAAGAAATCAACAGTGAGTTCGAGTCCAAACTCAAGAGCTTCCAAGTCAGTGATTCCTCTCAAGAACCGCAACCTAGACAGCAAGAGCTCGGGATGGAACATGTTAGATCGCTGGATGGCTGCAAAACCATGGGAGAGCAGGTCAATGGTTGAGATGTATTTGGACTCACCTGACATGACTCCAGTGACCAGTAAAAGTGATCGTCTTGTTCTTCCCTTTAATTCGGATCAACAAAATGGCTCGGTCAAAGCTAGAAGGAATGGTGTGACAACCAGGATTTCAGCTAAATCTCTTACAACTAGTCAATCAACTCCATCATCTTCAGCCATAAGCTCTGAATGCATGTATGATGATAGCCCTATGTCAACTTCATGCACATCTGGATCACCAACTCGACCATCTAACAAAAATGTTACAGTGGAAGCAATAGAGGAAAGAAATGTTTGTAAACCAAGCTACATGAATCTGACAGCATCAACCAAAGCTAAACTGAAACCGTATAGGTGTTTTTCTCAGAATTCAAAGAGAATCTTTATGGATGATTGTGTGTCACTAAGTGGAGTTACTAGAATCAGTTCTGGCTCCTATCCTTCTGCTGATACATGGAAGAATCTCTATGCAACACCTTTAAGGACAAGTTATCAAAAACGATATACATTGGAAGATAAGTAG 1332 0.4474 MGGSGRWLKSLISLRRPSPTDQEKGGDKSKRKWKLWKSTSEGFGIGSSMQKGQGGGGGGSFVVDDGAFAAALAAVVRTPLKDFMVIKQEWAAIRIQAVFRGFLARQALRALKAVVRLQAIFRGWQVRKQAAVTLRCMQALVRVQARVKARNVGNPQVGKSVSGRCNEADPVKQAEQNLPCYCQQGWCDIPGTEEEVKAKLQMRQEGAIKKDRTKAYSQSKKKSTVSSSPNSRASKSVIPLKNRNLDSKSSGWNMLDRWMAAKPWESRSMVEMYLDSPDMTPVTSKSDRLVLPFNSDQQNGSVKARRNGVTTRISAKSLTTSQSTPSSSAISSECMYDDSPMSTSCTSGSPTRPSNKNVTVEAIEERNVCKPSYMNLTASTKAKLKPYRCFSQNSKRIFMDDCVSLSGVTRISSGSYPSADTWKNLYATPLRTSYQKRYTLEDK 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0322 443 SMART iq_5 87 109 IPR000048 GO:0005515
Aed2g0322 443 SMART iq_5 110 131 IPR000048 GO:0005515
Aed2g0322 443 Gene3D - 86 140 - -
Aed2g0322 443 MobiDBLite consensus disorder prediction 209 246 - -
Aed2g0322 443 Pfam IQ calmodulin-binding motif 112 129 IPR000048 GO:0005515
Aed2g0322 443 Pfam IQ calmodulin-binding motif 90 109 IPR000048 GO:0005515
Aed2g0322 443 MobiDBLite consensus disorder prediction 219 246 - -
Aed2g0322 443 MobiDBLite consensus disorder prediction 292 332 - -
Aed2g0322 443 MobiDBLite consensus disorder prediction 1 32 - -
Aed2g0322 443 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 442 - -
Aed2g0322 443 PANTHER IQ-DOMAIN 5-RELATED 1 442 - -
Aed2g0322 443 ProSiteProfiles IQ motif profile. 112 139 IPR000048 GO:0005515
Aed2g0322 443 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 72 130 IPR027417 -
Aed2g0322 443 ProSiteProfiles IQ motif profile. 88 116 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0322 Aed-Chr2 2112169 2114361 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0322 1 426 IQD Protein Family AT1G72670 43.665 1.14e-86 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0322 - - gmx:100784093 712.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1351 1 12561342 12563158 Aed2g0322 2 2112169 2114361 PCT