Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0320 ATGGGGCATCACTCTTGCTGTAACAAGCAGAAGGTCAAAAGAGGACTATGGTCACCTGAAGAAGATGAAAAACTCATCAACTACATCACAACTTATGGACATGGTTGTTGGAGCTCTGTCCCAAAACTTGCAGGCCTTCAGAGGTGTGGAAAGAGTTGCAGATTAAGATGGATAAACTATCTAAGACCTGATTTGAAACGTGGAAGTTTCTCTCCTCAAGAAGCAGCCCTCATTATTGAACTCCACAGCATTTTAGGGAACAGGTGGGCTCAGATAGCCAAGCACCTACCTGGAAGAACAGATAATGAGGTGAAAAACTTTTGGAATTCAAGCATAAAGAAGAAACTCCTTTCTCATGATGTTATTCCAACTTTAGCCACATTTTCTGATTTTCACAGCCCTTCCATGGGAAGTTTCTTCCCTTTTACTGCAAACCCTAATTTGATCCTAAACTTTCATCATCACACAGACCACCAGCTCTACCTTCCCACCACAACACCATCCCCAATCCTACAAGGCTTTGATGATCATAGCAATGATGTTAAGTTAGACATTAACAATTATAATAATGTCAACAATTTCCTTCATATTCAGAATCCAATTGTACCAGAAATAGTACTACCGTCTTCCAATATTCCATCCTCTTATGAAGACACATGGTCATTGGGTTGTGTAGCTCTAGATCTCAATCCAAATCAAGAAAGTCAAATTACCAAAAGTGATACCACCACCTCACATCATCATGTTGTTGACAAATTCATCAACCAAGCTGCATTATTGCAACAATATGAAGATCAATTAGTAGAACCATTAATTGTGCCAAATCTCAGTGAGAGCATTGAGGATTATGTTTGTAGCATCCCATACTCATCATCTGCTTCCCAAGAACAACATGAGGCTACAACAAAATTTCAGTGTTATCCACAAGATCTAACTGTGGCAGCAAACCAATTAGAGTACATTGATGCATTCATGTAA 978 0.3926 MGHHSCCNKQKVKRGLWSPEEDEKLINYITTYGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGSFSPQEAALIIELHSILGNRWAQIAKHLPGRTDNEVKNFWNSSIKKKLLSHDVIPTLATFSDFHSPSMGSFFPFTANPNLILNFHHHTDHQLYLPTTTPSPILQGFDDHSNDVKLDINNYNNVNNFLHIQNPIVPEIVLPSSNIPSSYEDTWSLGCVALDLNPNQESQITKSDTTTSHHHVVDKFINQAALLQQYEDQLVEPLIVPNLSESIEDYVCSIPYSSSASQEQHEATTKFQCYPQDLTVAANQLEYIDAFM 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0320 325 PANTHER MYB DOMAIN PROTEIN 55 2 324 - -
Aed2g0320 325 Gene3D - 11 67 - -
Aed2g0320 325 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Aed2g0320 325 CDD SANT 17 61 IPR001005 -
Aed2g0320 325 SMART sant 66 114 IPR001005 -
Aed2g0320 325 SMART sant 13 63 IPR001005 -
Aed2g0320 325 PANTHER TRANSCRIPTION FACTOR MYB26 2 324 - -
Aed2g0320 325 Gene3D - 69 116 - -
Aed2g0320 325 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Aed2g0320 325 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Aed2g0320 325 Pfam Myb-like DNA-binding domain 67 109 IPR001005 -
Aed2g0320 325 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Aed2g0320 325 CDD SANT 69 109 IPR001005 -
Aed2g0320 325 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Aed2g0320 325 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0320 Aed-Chr2 2104219 2105500 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0320 1 118 MYB Transcription Factor Family AT3G13890 96.610 4.50e-82 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aed2g0320 Myb_DNA-binding 1.1e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0320 K09422 - gmx:100785147 553.903