Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0302 ATGGTACTGCAGCTGATTTTTCTGCTGATTGAGCTGCATTTAGTTGTCACCACTCAGCAGGTTCATGAATATGCAGCCACCAAGCTGCAACATTCCAGTGACAAAAGCCATTTTAGTATTGCAATCCCACCATCAAAGTCATCTTCTGAAGGTCATTCAAGTATTGCACTTTCACCTTCCAAGTCAATTCACAAAGCTCCTACAATTATATGGACACATGGTTCTGTGGATTCTCCTATCTCACATCATAAGCATCACTATTCCAAAAGAAAGTTCCACTATCCAACTACAGCGGCGGCTCCAACCTACCCAGTCCAGGCTCCCACATACAGTCATCAAGGTCCTTCAGTCTTCAAATCACAACCTCCTTTCTCCTCACCAAATATTAAGGATATTCATTCCCCTGCACCTGCACCATCGCCAGCAATTCTGGATGTACCCTCTTCTTCACCTAGAATTTCTCCTCTAGGTTCATCATTGAAGAAGAAAAAGACTCCACCACCAGCATATACATTGGTTCTGCCACCTCCACCTCCTAATAAGGATTGTGTGTCAGTGACTTGCTCAGAGCCCTTGACGTATACACCTCCTGGGTCACCTTGTGGTTGCGTGTGGCCGCTTCAGGTTAAACTCCATTTCAACATTGCAATATACAAGTTCTTTCCTCTGGTCTCAGAGCTAGCCAAGGAAATTGCAGCAAGTGTTCTGCTGAACCACACCCAGGTTCGCATTGTGGGAGCTGATGCAGCTAATCAGCAACTGGAGAAAACCACTGTTCTCATAGACTTAGTACCCAAAGGAGTAAAATTTGATGATACCACCGCATTTTTAATATATAAGAAATTCTGGCACAGGGAGATTCTGATAGATGCTTCAGTCTTTGGCACTTATGAAGTACTCTATGTTCATTATCCAGGTCTTCCACCATCTCCACCTTCAACTCCCTCAGATGCTTCTGGTATAGATGATGGGCCAAATCCAGGACATGCCAACGATGGAACAATGGTGAAACCTTTAGGAGTAGATGTCCCAAAGAAGAAAAAAGAAGGGAATAATGGAAGAATGATTGTTATAATTGTTCTGTCATCAGTTACTGCTTTTGTTGTAATCATTGGCCTTGCTTGGCTTTGTCTACTGAAATTCCGCACCTATGTTGATGAACATGAACCAGTCCCAGATGGTTTATCCTCTTCAAAACAATCAAGGGCTGCTAGGTCATTGAGTCATGGGATCAGGCTAGGCTCTGGATCAGGATCACAGTCCTTCAATTCTGGAACAATAACATATACAGGCTACTTAGCTCCTGAATATGCAATGACTGGCCATCTTCTGGTCAAGAGTGATGTTTACAGTTATGGAGTTGTTCTCCTTGAGCTCCTAACTGGAAGAAAGCCTGTGGATTTGTCACAACCACCAGGTCAAGAGAATCTCGTGACATGGGTTCGTCCACTTCTCACAAGTAAGGAAGGTTTGCAGATGATCATAGACCCATTTGTAAAGCCTAATATTTCTGTTGATACTGTGGTAAAAGTTGCAGCAATTGCATCCATGTGTGTGCAACCAGAAGTCTCTCAACGTCCTTTCATGGGAGAAGTTGTTCAGGCCTTGAAGCTAGTATGCAGTGAGTTTGAGGAAACAGAATTTATAAGATCAAAGAGTTCTCAAGAGGGTCTTCTAACTGATGTGGAAGGAAAGTTTTCTGATGCTTCAGGTGAAAAAGTGGAATTTTCAGAGTATCAAAAAACTCTTTCTGGCTATCAATCTGGTGATGAAAAGGTAAGATTATCAGCATCAGATTTGCTCAGTACTTCAGGTCAGGAATTTGAGTCATTCAGAAGGTATTCTCGTTCAGGGCCTCTAACTATTGGGAAGAAAAGGCAGTTCTGGCAGAAGTTGAGAAGTTTGTCTAGAGGTAGCTCCAGTGAACATGGATTTTCAACTAAACTATGGCCTGGATCCCGTTAA 1965 0.4285 MVLQLIFLLIELHLVVTTQQVHEYAATKLQHSSDKSHFSIAIPPSKSSSEGHSSIALSPSKSIHKAPTIIWTHGSVDSPISHHKHHYSKRKFHYPTTAAAPTYPVQAPTYSHQGPSVFKSQPPFSSPNIKDIHSPAPAPSPAILDVPSSSPRISPLGSSLKKKKTPPPAYTLVLPPPPPNKDCVSVTCSEPLTYTPPGSPCGCVWPLQVKLHFNIAIYKFFPLVSELAKEIAASVLLNHTQVRIVGADAANQQLEKTTVLIDLVPKGVKFDDTTAFLIYKKFWHREILIDASVFGTYEVLYVHYPGLPPSPPSTPSDASGIDDGPNPGHANDGTMVKPLGVDVPKKKKEGNNGRMIVIIVLSSVTAFVVIIGLAWLCLLKFRTYVDEHEPVPDGLSSSKQSRAARSLSHGIRLGSGSGSQSFNSGTITYTGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVTWVRPLLTSKEGLQMIIDPFVKPNISVDTVVKVAAIASMCVQPEVSQRPFMGEVVQALKLVCSEFEETEFIRSKSSQEGLLTDVEGKFSDASGEKVEFSEYQKTLSGYQSGDEKVRLSASDLLSTSGQEFESFRRYSRSGPLTIGKKRQFWQKLRSLSRGSSSEHGFSTKLWPGSR 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0302 654 Pfam Protein tyrosine and serine/threonine kinase 429 536 IPR001245 GO:0004672|GO:0006468
Aed2g0302 654 Gene3D Transferase(Phosphotransferase) domain 1 397 560 - -
Aed2g0302 654 MobiDBLite consensus disorder prediction 311 344 - -
Aed2g0302 654 MobiDBLite consensus disorder prediction 634 654 - -
Aed2g0302 654 PANTHER OS01G0750732 PROTEIN 430 653 - -
Aed2g0302 654 PANTHER OS01G0750732 PROTEIN 19 431 - -
Aed2g0302 654 MobiDBLite consensus disorder prediction 634 648 - -
Aed2g0302 654 PANTHER OS01G0750732 PROTEIN 430 653 - -
Aed2g0302 654 PANTHER OS01G0750732 PROTEIN 19 431 - -
Aed2g0302 654 MobiDBLite consensus disorder prediction 110 167 - -
Aed2g0302 654 SUPERFAMILY Protein kinase-like (PK-like) 423 536 IPR011009 -
Aed2g0302 654 MobiDBLite consensus disorder prediction 37 59 - -
Aed2g0302 654 MobiDBLite consensus disorder prediction 110 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0302 Aed-Chr2 1988890 1995414 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0302 431 654 Receptor kinase-like Gene Family AT5G56890 58.696 1.61e-69 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Aed2g0302 PK_Tyr_Ser-Thr 1.2e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0302 - - gmx:100814040 716.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1365 1 12645055 12649629 Aed2g0302 2 1988890 1995414 PCT