Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0294 ATGAATATTTTAACCTTAAGAGCAGCGGAGGAAACTCCTAAGCTCCTCCATGGAACAATTGAAGCTACCATCTTCAATGCCTCACCTTACTCACCTTTATTTCCCTTCAATTGCATAGGAACAAATGGAAATCCTGCTTATGTGACTATAAAGATAGACAACCAGAAGTTTGCAAAAACCAGCCAAGAAAGCAACCGTGTGTGGAACCAAACATTTCAGATTCAATGTGCTCATCCAGCTGATTCAGGCATCACCATCACACTGAAAACATCACGTTCTTCCATATTGGGGAAGTTCCATATTCAGGCTCAGCAGCTATTGAAGAAAGGAGGTTTGATCAACGGGTTCTTCCCTCTCCTCATGGATAATGGAAAACCAAACCAAAAACTTAAATTGAAGTTCCAGTTATGGTTCAAGCCAGCAGAATTGGAACCAAGTTGGGCAAAGATGTTGAGCAATGAATGGGAATTTCAAGGGCTGAGGGAGGCTAGCTTCCCACTAAGGTCCAATTGTCAGGTCAAACTCTATCATGATGCTCACCATTCTTCTGCTTTCCAACCTCCCTTTGATCTATGTGGAGCTCCAAGGAAACTATGGGAGGATGTCTATAAAGCCATTGAGGGTGCTAAGTTTTTAGTTAGAGATCCTCACACAGAAATCCCACATGCTAGAGGAATAAAGTTAGGTGAACTATTGAAGAAGAAGGCAGAGGAAGGAGTGGCTGTGAGGGTTATGCTTTGGGATGATGAAACATCTTTGCCCTTTGTTAAGAACAAAGGAGCTAGCCTCAACAAAGGAGGGCCAAGAGCACCTTGGCATGATGCTCATGCTTGTGTCACTGGTGAGGCTGCTTGGGATGTGTTAACCAATTTTGAGCAAAGATGGACAAAGCAATGTGATCCTTCTTTTCTAGTCCCTTCTAGCACCTTGGCAAATCTCATGCCTAGGACAAGCTCAAGCACTCTTATAGAGAGGAATTGGAAAGTTCAAGTATACAGGTTGATTGGAGAAGCCATACAAGAAAGTGGAGAACCAGGACACCCTAGAGACTACTTGAATTTCTTTTGTCTTGCAAATAGGGAGCAGAAAGGACAAGGGGAGTATCTTCCACTAGACTCTCCCCAACCTGAAACTCAATACTGGAATGCCCAAAAAAATAGGAGATTCATGCCAGAAAGATTGGACTGTGTGGAGAGAATGCGGTCAATAGGAGATGAAATGTGGGAAATCTACAGCAGTGAAGAAGAAATTGTGGACATGGAAGGTGTGCACCTTGTAACTTACCCTGTGAGAGTAACACAAGAAGGATATGTCAAAGATCTCACTGGTGGACTTCATTTTCCTGATACTAATTCTCTTGTCAAAGGTAAAAGGTCTAAAATATTGCCCCCTATCTTTACCACTTAG 1407 0.4271 MNILTLRAAEETPKLLHGTIEATIFNASPYSPLFPFNCIGTNGNPAYVTIKIDNQKFAKTSQESNRVWNQTFQIQCAHPADSGITITLKTSRSSILGKFHIQAQQLLKKGGLINGFFPLLMDNGKPNQKLKLKFQLWFKPAELEPSWAKMLSNEWEFQGLREASFPLRSNCQVKLYHDAHHSSAFQPPFDLCGAPRKLWEDVYKAIEGAKFLVRDPHTEIPHARGIKLGELLKKKAEEGVAVRVMLWDDETSLPFVKNKGASLNKGGPRAPWHDAHACVTGEAAWDVLTNFEQRWTKQCDPSFLVPSSTLANLMPRTSSSTLIERNWKVQVYRLIGEAIQESGEPGHPRDYLNFFCLANREQKGQGEYLPLDSPQPETQYWNAQKNRRFMPERLDCVERMRSIGDEMWEIYSSEEEIVDMEGVHLVTYPVRVTQEGYVKDLTGGLHFPDTNSLVKGKRSKILPPIFTT 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0294 468 PANTHER PHOSPHOLIPASE D 260 335 IPR015679 -
Aed2g0294 468 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 14 135 IPR035892 -
Aed2g0294 468 Pfam Phospholipase D C terminal 391 457 IPR024632 -
Aed2g0294 468 PANTHER PHOSPHOLIPASE D 391 468 IPR015679 -
Aed2g0294 468 PANTHER PHOSPHOLIPASE D 331 390 IPR015679 -
Aed2g0294 468 PANTHER PHOSPHOLIPASE D 9 260 IPR015679 -
Aed2g0294 468 Gene3D C2 domain 21 140 IPR035892 -
Aed2g0294 468 PANTHER PHOSPHOLIPASE D ALPHA 331 390 - -
Aed2g0294 468 PANTHER PHOSPHOLIPASE D ALPHA 391 468 - -
Aed2g0294 468 Pfam C2 domain 45 119 IPR000008 -
Aed2g0294 468 Gene3D Endonuclease Chain A 260 328 - -
Aed2g0294 468 PANTHER PHOSPHOLIPASE D ALPHA 260 335 - -
Aed2g0294 468 PANTHER PHOSPHOLIPASE D ALPHA 9 260 - -
Aed2g0294 468 SUPERFAMILY Phospholipase D/nuclease 163 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0294 Aed-Chr2 1906899 1910141 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0294 391 468 Phospholipase D Gene Family (Wang group) AT1G55180 56.410 8.72e-22 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0294 K01115 - gmx:100812642 488.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0294 2 1906899 1910141 Aed2g0294 2 1906899 1910141 ECH
Aed1g1373 1 12705082 12707723 Aed2g0294 2 1906899 1910141 PCT