Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0289 ATGAGTCGAGAGCAACAGAAGCGGGGGAAGCAAGAGAAAGGTTCTGATGGTGCTGAGAAGGTCATTGTTGCCGTTAAGGCTTCAAGGGAAATTCCAAAGACTGCTCTTGTTTGGTCCCTCTCTCATGTAGTTCAACCTGGGGATTGCATTACACTACTTGTGGTTGTGCCTTCACAAACTTCAGGCAGAAGATTATGGGGTTTTCCAAGATTTGCTGGTGACTGTGCCAGCGGTATTAAGAAGTACCCTCCAGGAACAATATCAGAGCAGAAGATGGATATCACTGATTCTTGCTCTCAGATGATCCTACAGCTTCACAACGTCTATGATCCAAACAAGATAAATGTCAGGATCAAAATTGTTGCCGGGTCACCTTGTGGAGCAGTGGCTGCAGAAGCCAAAAAAGCACAAGCCAATTGGGTCGTATTAGACAAACAGCTCAAGCACGAGGAAAAGCGATGCATGGAAGAACTGCAGTGTAACATTGTAGTTATGAAGCGTTCTCAACCGAAAGTACTGCGCTTGAATTTGATTGGACCACAGAAGAAGGATGTAGAACAAGCAGGTCCATCACCTTCTCTGCAAGATGACACACCCGGAAACCGAACCAAAATAAAGCTTGATTCCTTAAATTCTATCAAAGGACCAGCTGTAACTCCAACTAGCAGCCCTGAGCTTGGGACACCGTTCACCGCAACTGAAGCTGGTACCTCATCAGTTTCAAGCTCTGATCCAGGAACTTCACCATTTTTCATCTCAGAGATGACCAAAAAAGAGAAAACTATCAAGGAAAGTCAAGAACTGGTGGATACTAATTCAGACACAGAAAGTGAAAGTCTGTCCACATCTTCAGCAAGCATGAGGTACCAGCCATGGATCACAGAATTGCTTTTACATCAACAATCATCACAACACAATGAAGAGCGATCGGATATATCTCATGGTATGCCTCAAGCATCTACAACCAGAGCTTTCCTAGAAAAGTATTCTAGGCTTGACAAGGGAGCTGGATTTGAAACCTCAACCTATAGAAATGAGATGGATTTCAGTGGAAATTTAAGAGAAGCAATAGCATTATCCGGAAACGTCCCACCTGGCCCCCCTCCATTATGCTCAATATGTCAACACAAGGCACCTGTTTTTGGAAAACCTCCTAGGTGGTTCAGCTATGCTGAGTTGGAACTTGCTACTGGTGGATTTTCACAGGCCAATTTCTTGGCAGAAGGAGGGTTTGGGTCTGTTCACAGAGGGGTTTTACCAGAAGGGCAAGTCATTGCTGTCAAGCAACATAAGTTGGCTAGTTCTCAGGGTGATCTTGAATTTTGCTCAGAGGTGGAAGTCTTGAGCTGTGCTCAGCACCGGAATGTTGTTATGCTCATTGGGTTCTGCATTGAGGATAAGAGAAGGCTACTGGTTTATGAGTATATATGCAATGGATCATTGGATTCACATTTATATGGTGATTTCTCTTGCTCATATACCAAATTATTTTATGATAGAAATATATTTTGA 1512 0.4352 MSREQQKRGKQEKGSDGAEKVIVAVKASREIPKTALVWSLSHVVQPGDCITLLVVVPSQTSGRRLWGFPRFAGDCASGIKKYPPGTISEQKMDITDSCSQMILQLHNVYDPNKINVRIKIVAGSPCGAVAAEAKKAQANWVVLDKQLKHEEKRCMEELQCNIVVMKRSQPKVLRLNLIGPQKKDVEQAGPSPSLQDDTPGNRTKIKLDSLNSIKGPAVTPTSSPELGTPFTATEAGTSSVSSSDPGTSPFFISEMTKKEKTIKESQELVDTNSDTESESLSTSSASMRYQPWITELLLHQQSSQHNEERSDISHGMPQASTTRAFLEKYSRLDKGAGFETSTYRNEMDFSGNLREAIALSGNVPPGPPPLCSICQHKAPVFGKPPRWFSYAELELATGGFSQANFLAEGGFGSVHRGVLPEGQVIAVKQHKLASSQGDLEFCSEVEVLSCAQHRNVVMLIGFCIEDKRRLLVYEYICNGSLDSHLYGDFSCSYTKLFYDRNIF 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0289 503 SUPERFAMILY Protein kinase-like (PK-like) 375 490 IPR011009 -
Aed2g0289 503 Pfam Protein tyrosine and serine/threonine kinase 404 486 IPR001245 GO:0004672|GO:0006468
Aed2g0289 503 MobiDBLite consensus disorder prediction 261 284 - -
Aed2g0289 503 PANTHER KINASE WITH ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE DOMAIN-CONTAINING PROTEIN 16 487 - -
Aed2g0289 503 Gene3D Phosphorylase Kinase; domain 1 372 475 - -
Aed2g0289 503 PANTHER OS01G0253100 PROTEIN 16 487 IPR045271 GO:0004714|GO:0006468
Aed2g0289 503 MobiDBLite consensus disorder prediction 191 249 - -
Aed2g0289 503 CDD USP_Like 20 143 - -
Aed2g0289 503 ProSiteProfiles Protein kinase domain profile. 400 503 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g0289 503 MobiDBLite consensus disorder prediction 181 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0289 Aed-Chr2 1885819 1889585 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0289 375 491 Trihelix Transcription Factor Family AT1G68690 50.427 5.71e-31 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Aed2g0289 PK_Tyr_Ser-Thr 6.8e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0289 - - gmx:100816340 912.909
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0289 2 1885819 1889585 Aed2g0289 2 1885819 1889585 ECH