Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0286 CGTGTAAGTTGTAATTTTTCAATATGGCCAGTACACATTCTAACTGTTTTCTGTGCCTTCCAAAACCATTGCTACTTTGTCCCACAAGAAACCATAGATGCCAGTTTATATGAGCCTCTATTAGTTCATAAGGACATGCATAAACAAACAGAACTAGGCCATGCCACCTTTCTAAGCAGATTCACTTTCTCTTGGATGAATGCTTTACTCAGTTTGGGTTACTCAAAGCCACTAGCACTTGAAGACATCCCTTCTCTTGCTTCTGAAGATAAAGCTGATTTTGCCTACCAAAAGTTTGCACATGCATGGGATTCCCTTTTGAGAGAGAGGAGCAGGGTCAATTCTAGAAACTTGGTTCTATGGTCCATTGCCCGAGTTTACTTGAAAGAGAACATCTTCATAGCCATTTGCGCATTTCTCAGGACAATTTGTGCTGTTGTTTCTCCTTTACTTGTCTACGCTTTTGTAAACTATTCCAGTAGCATTGAGGAAGAGCTAAAACAAGGAATAGCCATAGTGGGGTGTCTTATATTTGCCAAGGTGGTTGAGTCTGTGTCTCAGAGGCATTGGTCTTTTAACTCAAGGAGGTTAGGAATGAAAATGAGATCCGCTTTAATGGCTGCAGTGTACCAAAAGCAATTAAAACTTTCAGCTTTGGGTAGGAGAAGACATTCAACTGGTGAGATTGTGAATTACATTGCAGTTGATGCATATCGAATGGGAGAGTTTCCGTGGTGGCTTCATACATTGTTCTTTTCTGCATTGCAAGTTTTTCTGGCTCTTGGTGTCCTTTTTGGTGTTGTGGGTCTGAGTGCTCTTCCTGGTTTAGTGCCTCTTATCATTTGTGGATTTCTCAATATACCATTTGCAAAGATCCTTCAGAAATGTAGGTCGGAATTTATGATTGCACAGGATGAGCGTCTGAGGTCAACTTCAGAGATTCTTAGTAGTATGAAAATCATAAAGCTACAATCCTGGGAGGATAACTTCAAGAAGTTAGTTGAATCCCTTCGCGCTAAAGAGTTTAAATGCTTGGCTGAAGCACAATTCATGAGAGCTTATGGAACATTTATATATTTGATGTCTCCTGCCATCATTTCTTCGGTTATTTTCACGGGATGTGCGCTTTTCCAGAGTGCCCCTTTGGATGCTGCAACTATCTTCTCAGTTCTTGCAGCTTTGAGAAGCATGGGAGAACCTGTCACATTGATTCCAGAAGCGCTTTCTGTTCTGATCCAAGTTAAGGTGTCCTTTGATCGTCTCAACACCTTTTTGCTTGATGATGAGATAAAATGTGATGATATTAGAAGAACTTCAAAACAAGATTCTTGCAGCAAGAGTGTTGAAATTCTAGCAGGCAACTTCAGTTGGGATCAGCAATCAGGGGCTTCAACTTTAAGGAAAGTGAATTTAGAGATCAAGTGGGGGCATACAGTAGCAGTTTGTGGCCCAGTTGGAGCTGGAAAAACATCTCTCCTATATGCAATACTTGGAGAGATACCCAAAATTTCAGGAACTGTTAGTGTAGGTGGAACACTTGCCTACGTTTCCCAAACCCCTTGGATCCAAAGTGGTACAATTCGTGATAATATTCTCTATGGAAAACCAATGGATGAAACCAGGTATGAATATACCATTAAGGTCTGTGCCTTGGATAAGGATATTGATGGATTTAGCCATGGTGATCTTACAGAAATCGGTCAGAGAGGGATTAACATGAGTGGAGGACAAAAGCAAAGGGTTCAACTAGCTCGTGCATTCTATAATGATGCTGATATCTATCTCCTAGATGACCCTTTTAGTGCTGTAGATGCTCATACTGCTTCTATTCTGTTTAATGATTGTGTCAGGGTTGCTTTAAGAAGGAAAACAGTTATTCTTGTGACTCATTTAGTTGAATTTCTCTCAGAACTTTTGAGTGCTCATAGAGAGGCAATTACAGGGATAGAAAAAAGTAGTGCAAACAAAAGAGAAGTTGAAAATGTGGTTAGAGTTCAGCGTGAGGATTCTCATGTTTCTAATCTCACTAAAGGTGGAAGTGATGAAGACATTTCTACCAAGGGTCAACTTACACAAGAAGAAGAAAAGGAGAATGGTGATGTTGGGTGGAAGCCATTCTGTGACTATATTTTGTTCCCCAAAGGATCTTTGCTTCTATGTTTGAGCATATTATCACAGTTGGCTTTTGTAGGCTTTCAGGCTGCATCAACCTATTGGCTGACTCTAGCCAATGAAATGCCAAAAGTAACTAGCAGCATCTTAATTGGAGTTTATAGTGTGATTTCTTTTTTAAGCACTGTCTTTGTATATCTGAGGTCTTACTTTGCTGCACATCTTGGTTTAAAAGCATCTAAAGCTTTTTTCTCTGCCTTCACTGATGCTATCTTTAATGCTCCTATGTGTTCTTTGATTCAACCCCTGGAGGATTTTGACCCGAGTAAGGCTTCATCAGATTTGAGTATTTTAGATTTTGATGTCCCTTTTACCACCATCTTTGTAACAGCTGAAATAACTGAACTTCTGACAATGATTGGGATAATGGTTTCGGTCACATGGCAAGTGCTCATTGTTGCAGTTCTTGCCATGGTGGGCTCAAAATATGTTCAGGGCTATTATCAAGCATCTGCTAGAGAAATTATACGGATCAATGGAACTACAAAAGCTCCTCTTATGAATTTTGCAACTGAGACATCACTTGGTGCGGTTACTATAAGAGCTTTCAGCCTGGCTGACAGATTTTTCAAAAACTACCTTAATCTTGTTGACACAGATGCCACAATGTTCTTTCATTCCAATGCTGCCATTGAATGGTTAATTCTAAGAGTTGAATTACTTCAAAATTTGACACTCTTCATTGCAGCTTTGCTGCTTGTTCTACTTCCAAAGGGATATGTGGCCCCTGGCCTTGTGGGACTGTCTCTATCTTATGCTTTTTCATTGACAGCAACCGTAGTTTATCTGACTCGAATGTTCTGTAACTTATCAAACTATGTGATCTCTGTTGAAAGAATCAAGCAATTCATTCACATACCAGCAGAGCCTAGTGCAATTGTAGAGAATAATAGACCACCACCTACTTGGCCTTCGAAGGGTAGAATAGATCTCCAATCTCTTGAGATTAGATATCGTCAAAATGCTCCATTAGTTCTTAAGGGCATCTCTTGTAGGTTTAAAGAAGGGAGTAGAGTGGGAGTTGTGGGAAGGACTGGAAGTGGAAAAACTACACTTATAAGTGCTTTGTTTCGCTTAGTTGAGCCTACTAGAGGTGGCATTCTTATAGATGGGATTAATATATGCTCAATAGGGTTAAAAGATTTGAGAACAAAGCTAAGCATCATTCCTCAAGAACCAACTCTTTTCAAGGGTAGCATTCGAAAGAACTTGGACCCTCTATGCCTGTACCCTGATGATGAAATATGGAAGGCTTTAGAGAAATGTCAGCTTAAGGCAACAATTACTAGTCTACCAAATCTCTTGGACACTTCTGTGAGTGATGAAGGTGAAAACTGGAGTGCGGGGCAGCGCCAACTCATGTGTCTAGGAAGAGTACTTCTTAAGAGGAACAGAATTATTGTGCTGGATGAAACTACTGCTTCCATTGATTCTGCCACAGATGTTATTCTACAAAAAGTCATCAGAGAAGAATTTTCAGAATGCACAGTTATAACAGTGGCTCACAGAGTTCCAACTGTGATAGACAGTGACATGGTCATGGTCCTATGTTATGGGAAACTGGTGGAGTATGATAAGCCTTCAAAGCTTATGGCTACTAACTCGTCATTCTCTAAGCTGGTTGCAGAGTATTGGTCCAACTGCAATACGCATTTGCTCCCAAAAGATTAG 3843 0.4018 RVSCNFSIWPVHILTVFCAFQNHCYFVPQETIDASLYEPLLVHKDMHKQTELGHATFLSRFTFSWMNALLSLGYSKPLALEDIPSLASEDKADFAYQKFAHAWDSLLRERSRVNSRNLVLWSIARVYLKENIFIAICAFLRTICAVVSPLLVYAFVNYSSSIEEELKQGIAIVGCLIFAKVVESVSQRHWSFNSRRLGMKMRSALMAAVYQKQLKLSALGRRRHSTGEIVNYIAVDAYRMGEFPWWLHTLFFSALQVFLALGVLFGVVGLSALPGLVPLIICGFLNIPFAKILQKCRSEFMIAQDERLRSTSEILSSMKIIKLQSWEDNFKKLVESLRAKEFKCLAEAQFMRAYGTFIYLMSPAIISSVIFTGCALFQSAPLDAATIFSVLAALRSMGEPVTLIPEALSVLIQVKVSFDRLNTFLLDDEIKCDDIRRTSKQDSCSKSVEILAGNFSWDQQSGASTLRKVNLEIKWGHTVAVCGPVGAGKTSLLYAILGEIPKISGTVSVGGTLAYVSQTPWIQSGTIRDNILYGKPMDETRYEYTIKVCALDKDIDGFSHGDLTEIGQRGINMSGGQKQRVQLARAFYNDADIYLLDDPFSAVDAHTASILFNDCVRVALRRKTVILVTHLVEFLSELLSAHREAITGIEKSSANKREVENVVRVQREDSHVSNLTKGGSDEDISTKGQLTQEEEKENGDVGWKPFCDYILFPKGSLLLCLSILSQLAFVGFQAASTYWLTLANEMPKVTSSILIGVYSVISFLSTVFVYLRSYFAAHLGLKASKAFFSAFTDAIFNAPMCSLIQPLEDFDPSKASSDLSILDFDVPFTTIFVTAEITELLTMIGIMVSVTWQVLIVAVLAMVGSKYVQGYYQASAREIIRINGTTKAPLMNFATETSLGAVTIRAFSLADRFFKNYLNLVDTDATMFFHSNAAIEWLILRVELLQNLTLFIAALLLVLLPKGYVAPGLVGLSLSYAFSLTATVVYLTRMFCNLSNYVISVERIKQFIHIPAEPSAIVENNRPPPTWPSKGRIDLQSLEIRYRQNAPLVLKGISCRFKEGSRVGVVGRTGSGKTTLISALFRLVEPTRGGILIDGINICSIGLKDLRTKLSIIPQEPTLFKGSIRKNLDPLCLYPDDEIWKALEKCQLKATITSLPNLLDTSVSDEGENWSAGQRQLMCLGRVLLKRNRIIVLDETTASIDSATDVILQKVIREEFSECTVITVAHRVPTVIDSDMVMVLCYGKLVEYDKPSKLMATNSSFSKLVAEYWSNCNTHLLPKD 1280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0286 1280 Gene3D ABC transporter type 1, transmembrane domain 683 1014 IPR036640 GO:0005524|GO:0016021
Aed2g0286 1280 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 717 996 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed2g0286 1280 ProSitePatterns ABC transporters family signature. 573 587 IPR017871 GO:0005524
Aed2g0286 1280 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1022 1266 IPR027417 -
Aed2g0286 1280 CDD ABC_6TM_ABCC_D2 728 1008 IPR044726 GO:0140359
Aed2g0286 1280 CDD ABCC_MRP_domain2 1031 1251 - -
Aed2g0286 1280 SMART AAA_5 475 653 IPR003593 -
Aed2g0286 1280 SMART AAA_5 1059 1252 IPR003593 -
Aed2g0286 1280 Pfam ABC transporter 466 600 IPR003439 GO:0005524
Aed2g0286 1280 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1035 1267 IPR003439 GO:0005524
Aed2g0286 1280 Pfam ABC transporter transmembrane region 720 977 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed2g0286 1280 Pfam ABC transporter transmembrane region 132 393 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed2g0286 1280 Gene3D - 424 667 IPR027417 -
Aed2g0286 1280 Gene3D ABC transporter type 1, transmembrane domain 119 423 IPR036640 GO:0005524|GO:0016021
Aed2g0286 1280 PANTHER NHPM BACTERIOCIN SYSTEM ABC TRANSPORTER, PEPTIDASE/ATP-BINDING PROTEIN-RELATED 5 638 - -
Aed2g0286 1280 SUPERFAMILY ABC transporter transmembrane region 717 1013 IPR036640 GO:0005524|GO:0016021
Aed2g0286 1280 Gene3D - 1016 1267 IPR027417 -
Aed2g0286 1280 MobiDBLite consensus disorder prediction 669 697 - -
Aed2g0286 1280 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 448 634 IPR027417 -
Aed2g0286 1280 CDD ABCC_MRP_domain1 448 637 - -
Aed2g0286 1280 SUPERFAMILY ABC transporter transmembrane region 120 427 IPR036640 GO:0005524|GO:0016021
Aed2g0286 1280 PANTHER NHPM BACTERIOCIN SYSTEM ABC TRANSPORTER, PEPTIDASE/ATP-BINDING PROTEIN-RELATED 638 1271 - -
Aed2g0286 1280 CDD ABC_6TM_ABCC_D1 133 421 IPR044746 GO:0140359
Aed2g0286 1280 Pfam ABC transporter 1050 1198 IPR003439 GO:0005524
Aed2g0286 1280 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 132 413 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed2g0286 1280 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 430 672 IPR003439 GO:0005524
Aed2g0286 1280 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 5 638 - -
Aed2g0286 1280 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 638 1271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0286 Aed-Chr2 1858982 1864387 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0286 387 642 Calmodulin-binding Proteins AT2G36910 29.889 1.17e-20 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0286 - - gmx:100813711 2221.05