Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0267 ATGGCGACAGTTCCAGGGCAACTCGTGTGGGAGATCGTGAAGAAGAACAACTCCTTTTTGGTCAAACAGTTCGGAAGGGGCACTCAGAGCGTCGAATTCAGCAGAGAGAGCAACAATCTCTACAACCTCAATTCGTTCAAGTACTCTGAGTTGGCTTCATCTGAGAAACATTTTATGGATTGGATGAATGTGTTTCGATTGTTTGTGGCTAAATGTCTTATTTCCGTCATGGCAGGCTTGGCAAACAAGAAAACTGTTACCGTTCAGCCTGAGGGTAAGGATCAAGCTGTGTTGTTGGCTACAACAAAGTCGAAGAAGCAAAACAAGCCTGCTGCATTGCTCCACAAATCTGTAATGAAGAAGGAATTCAGAAGGATGGCAAAGGCTGTTGAGAATCAGGTGGCAGAAAATTACTACAGGCCTGATCTCAAGAAGGCTGCCCTTGCAAGGTTGAGTGCTGTTCACAGAAGCCTCAAAGTTGCCAAGTCTGGTGTCAAGAAGAGGAATAGACAGGGCGTGAAGGTCCTTGGGAGGAAGTGA 540 0.4611 MATVPGQLVWEIVKKNNSFLVKQFGRGTQSVEFSRESNNLYNLNSFKYSELASSEKHFMDWMNVFRLFVAKCLISVMAGLANKKTVTVQPEGKDQAVLLATTKSKKQNKPAALLHKSVMKKEFRRMAKAVENQVAENYYRPDLKKAALARLSAVHRSLKVAKSGVKKRNRQGVKVLGRK 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0267 179 PANTHER 60S RIBOSOMAL PROTEIN L28-1-LIKE 1 54 - -
Aed2g0267 179 PANTHER 60S RIBOSOMAL PROTEIN L28 78 179 IPR002672 GO:0003735|GO:0005840|GO:0006412
Aed2g0267 179 Pfam Ribosomal L28e protein family 8 157 IPR029004 -
Aed2g0267 179 Gene3D - 1 57 - -
Aed2g0267 179 Gene3D - 75 162 - -
Aed2g0267 179 PANTHER 60S RIBOSOMAL PROTEIN L28-1-LIKE 78 179 - -
Aed2g0267 179 PANTHER 60S RIBOSOMAL PROTEIN L28 1 54 IPR002672 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0267 Aed-Chr2 1729236 1731861 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0267 1 171 Cytoplasmic Ribosomal Protein Gene Family AT4G29410 59.649 1.88e-68 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0267 K02903 - gmx:100499921 269.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0267 2 1729236 1731861 Aed1g1384 1 12767060 12769031 ECH
Aed2g0267 2 1729236 1731861 Aed2g0267 2 1729236 1731861 ECH
Aed1g1384 1 12767060 12769031 Aed2g0267 2 1729236 1731861 PCT