Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0250 ATGGCGACGGCGCCGGGAAATCAAATGTTGGAGAGCGGAGGAGGAGCGCCGCAGCCTCCGGGGACAGACATGACCGGAATATGCTTCCGAGATCAGCTCTGGCTCAACAGCTTCCCTCTGGATCGCAACTTGGTTTTCGATTACTTCGCACTCTCCCCTTTCTATGATTGGACTTGCAACAACGAGCAGCTCCGTATGCGCTCCGTTCACCCCCTCGACCTCTCTCAACTCTCGAAAATGACGGGTACGGAGTATATGCTCAGCGAAGTCATGGAGCCGCACCTGTTTCTCATTCGCAAGCAGAAGAGAGATAGCCCCGACAAAGTAACGCCTATGCTTGCCTATTACGTCCTCGATGGTTCTATTTACCAGGCTCCGCAACTCTGCAATGTCTTTGCCGCCAGAATTGGAAGGGCCCTTTATTACATACAAAAGGCATTTACAACTGCTGCCTCCAAGTTGGAGAAGATTGGATATGCTGGGTCAGTTGATTCTGAAAATGAGACTGCATTGCTGGAATCAAAGACTGCTAAGGAGACAATTGACATAAAGGAAGTTAAGCGAGTGGATCATATTCTTGCATCCTTGCAACGCAAGTTAGCACCAGCTCCTCCACCACCACCATTTCCAGAAGGGTATGTTCCACCGCCAACAGCAGAAACTGATCAGAAAGGCACTGAAACACAGGAAGCAGCAGAAACGCAAGCTCCTACTGCTGATCCCATAATTGATCAAGGACCAGCAAAAAGGATGAAATTTTGA 762 0.4948 MATAPGNQMLESGGGAPQPPGTDMTGICFRDQLWLNSFPLDRNLVFDYFALSPFYDWTCNNEQLRMRSVHPLDLSQLSKMTGTEYMLSEVMEPHLFLIRKQKRDSPDKVTPMLAYYVLDGSIYQAPQLCNVFAARIGRALYYIQKAFTTAASKLEKIGYAGSVDSENETALLESKTAKETIDIKEVKRVDHILASLQRKLAPAPPPPPFPEGYVPPPTAETDQKGTETQEAAETQAPTADPIIDQGPAKRMKF 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0250 253 Pfam MED6 mediator sub complex component 27 152 IPR007018 GO:0003712|GO:0006357|GO:0016592
Aed2g0250 253 PANTHER MED-6-RELATED 12 253 IPR007018 GO:0003712|GO:0006357|GO:0016592
Aed2g0250 253 MobiDBLite consensus disorder prediction 199 253 - -
Aed2g0250 253 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 6 12 253 - -
Aed2g0250 253 MobiDBLite consensus disorder prediction 200 215 - -
Aed2g0250 253 MobiDBLite consensus disorder prediction 1 22 - -
Aed2g0250 253 MobiDBLite consensus disorder prediction 221 235 - -
Aed2g0250 253 Gene3D Mediator complex, subunit Med6 21 150 IPR038566 -
Aed2g0250 253 PIRSF MED6_meta/plant 14 253 IPR016820 GO:0003712|GO:0006357|GO:0016592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MED6 Aed2g0250 Med6 4e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0250 K15128 - gmx:100792248 466.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0250 2 1649213 1652571 Aed2g0250 2 1649213 1652571 ECH