Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0238 ATGGGGAAGGCTAGCAGGTGGTTGAAGGGATTGTTGGGGATGAAGAAGGAGAAGGAGAAGGACAACAGTGACAACAATTCAGGCTCATTGGCTCCTGATAAGAAGGAGAAGAAAAGGTGGAGTTTTGCCAAGCCAGGGAAGGATGTGCCACCTTCAGTTCCTGCAACTGATAACAACACCTGGCTCAGATCCTATATTTCTGAGACAGAGAATGAGCAGAACAAGCATGCAATTGCCGTCGCAGCGGCCACTGCGGCTGCTGCCGATGCCGCCGTGGCCGCGGCGCAGGCCGCCGTGGCGGTTGTGAGGCTCACAAGCCAGGGGAGAGGAACATTGTTCAGTGGAAGCAGGGAGAAGTGGGCTGCTGTCAAGATCCAAACTTTTTTTAGAGGCTACTTGGCACGGAAGGCTCTTAGAGCACTGAAAGGATTGGTTAAGATACAAGCTCTTGTTAGGGGGTATTTGGTTAGAAAAAGGGCTGCTGCAACGCTTCACAGTATGCAAGCTCTAATAAGAGCTCAAACTGCTGTTAGAACACAGCGAGCTCGTCGTTCCATGAGCAAAGAAAACAGATTTCTACCCGAAGTTCATGCAAGAAAATCTGTGGAACGATTTGATGAAACAAGGAGCGAATTCCACAGTAAAAGGCTACCTACATCGTATGAAACATCCTTGAATGGTTTTGACGAGAGCCCCAAGATTGTTGAAATTGACACATACAAGACTCGATCAAGGTCTAGGCGATTTTCCTCTATAATGTCTGAGTGTGGAGAAGACATGTCCTACCACGCAATCTCATCCCCTCTTCCTTGTCCAGTCCCGGGTCGAATCTCGGTTCCAGATTGCAGACACATTCAAGATTATGATTGGTACTACAATGTTGATGAGTGTAGATTCTCCACTGCTCATAGCACCCCACGTTTCACAAACTATGTGCGGCCAAATAATGCTCCAGCTACACCAGCCAAGAGTGTTTGTGGAGATTCATTCTTCAGACCTTGCTCTAATTTCCCCAACTACATGGCCAACACTCAGTCATTCAATGCAAAACTAAGGTCTCACAGTGCTCCAAAGCAAAGACCTGAACCCAAGAAAAGGCTCTCACTCAATGAAATGATGGCAGCAAGAAACAGCATCAGTGGTGTTAGAATGCAAAGGCCATCATCCAATTTCTTCCAGACTCAAGAAGAAGAAGAATCCTGGAATTTTTGA 1212 0.4711 MGKASRWLKGLLGMKKEKEKDNSDNNSGSLAPDKKEKKRWSFAKPGKDVPPSVPATDNNTWLRSYISETENEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSQGRGTLFSGSREKWAAVKIQTFFRGYLARKALRALKGLVKIQALVRGYLVRKRAAATLHSMQALIRAQTAVRTQRARRSMSKENRFLPEVHARKSVERFDETRSEFHSKRLPTSYETSLNGFDESPKIVEIDTYKTRSRSRRFSSIMSECGEDMSYHAISSPLPCPVPGRISVPDCRHIQDYDWYYNVDECRFSTAHSTPRFTNYVRPNNAPATPAKSVCGDSFFRPCSNFPNYMANTQSFNAKLRSHSAPKQRPEPKKRLSLNEMMAARNSISGVRMQRPSSNFFQTQEEEESWNF 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0238 403 MobiDBLite consensus disorder prediction 1 56 - -
Aed2g0238 403 ProSiteProfiles IQ motif profile. 142 169 IPR000048 GO:0005515
Aed2g0238 403 Pfam IQ calmodulin-binding motif 145 159 IPR000048 GO:0005515
Aed2g0238 403 Pfam IQ calmodulin-binding motif 120 139 IPR000048 GO:0005515
Aed2g0238 403 ProSiteProfiles IQ motif profile. 118 146 IPR000048 GO:0005515
Aed2g0238 403 Pfam Protein of unknown function (DUF4005) 305 380 IPR025064 -
Aed2g0238 403 PANTHER IQ-DOMAIN 5-RELATED 1 390 - -
Aed2g0238 403 MobiDBLite consensus disorder prediction 10 44 - -
Aed2g0238 403 Gene3D - 61 144 - -
Aed2g0238 403 PANTHER PROTEIN IQ-DOMAIN 14-LIKE 1 390 - -
Aed2g0238 403 MobiDBLite consensus disorder prediction 381 403 - -
Aed2g0238 403 MobiDBLite consensus disorder prediction 378 403 - -
Aed2g0238 403 SMART iq_5 140 161 IPR000048 GO:0005515
Aed2g0238 403 SMART iq_5 117 139 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0238 Aed-Chr2 1587251 1591029 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0238 1 384 IQD Protein Family AT3G16490 56.313 3.55e-116 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0238 - - gmx:100797686 667.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0238 2 1587251 1591029 Aed2g0238 2 1587251 1591029 ECH
Aed1g1401 1 12877001 12878591 Aed2g0238 2 1587251 1591029 PCT