Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0234 ATGGTGATTCTGGTGCAAAAACTCCATTGGGGGTTGCTTCTTCTCTTTCTCCTCTTTCAGCTCCACCTTCACTGCAGCACCTGTTACCCCACGGAACCCATGAACTGTACGGACACAAGCCGCCTCTGCACTTCTTTCATTGCCTTCAAGCCTGGACCGAACCACACACTTGCTCTGATTCAGAGCATGTTTGATGTGTTGCTTGATGACATCACAGTTGAAGGCAACGGTTGGGGTTACATGTTCATTAGGAAGAACTGTTCTTGTGCTGCTGGTATAAAAAAATACGTGTCCAGCACCACTTTCACTGTGAAATCCAATGAAGGGTTGGTGTATGACACGGTGATGGATGCCTATGATGGCCTTGCTTTACTTCCCAACACCACAAGGAGGGCAAGGAATGGTGCTGTTGTGTCACTGAGGTTGTTTTGTGGCTGCTCCAGTGGACTGTGGAACTATTTGGTCAGTTATGTGATGAGAGATGGGGACAGTGTTGAGTCCTTGGCAAGCAGGTTTGGGGTTAGTATGGATAGCATTGAGAGGGTGAATGGCATTGGTAATCCTGATAATGTCACTGTTGGTTCACTTTATTATATACCCCTTGATTCTGTTCCTGGTGATCCTTATCCCCTGAATAACGCTGCTCCACCAGTTCCTGTTCCTTCCCCATCCTTTGATAATTTTTCAGCTGATCAAGTCTATCATAAGGCTCATGTACCCTACGGATGGATCATTGGGGGCTTAGGAGTTGGTCTTCTTCTAATAATATTAACTGTGATTCTCTGTGTGTGTCTGAGACCATCAAGTTGTTTTGCTGATGCCAGAACTCATGAGAAAGATGCTGAGGGCAAGATCTCTCATAAATTCCATATTCTTCGGAACCCAAGTTTTTTTTGTGGTTCTGGAAGGTACATATGTGGCAAGCATGTTGAGCAGAAGCAAACAGATGGTGAATCCAGCAATCACACGATTACCATTCCCATTCCCAAAGCTTCAACTCTCGGGCCTGACGTGTTTGACATGGATAAACCTGTTGTTTTTACATATGAAGAGATTTTCTCCAAAACAGATGGTTTCTCTGATTCAAATTTACTTGGGCATGGAACATATGGTTCTGTTTATTATAGCCTCCTTCGCGATCAGGAAGTTGCTATTAAAAGAATGACAGCTACTAAGACAAAAGAGTTTATGTCAGAGATGAAAGTTTTGTGCAAGGTTCATCATGCTAATCTGGTAGAATTGATTGGCTATGCAGCTAGTCATGAGGAGCTTTTCCTAGTTTATGAATATGCTCAGAAGGGTTCACTCAGAAGCCATTTGCATGATCCTCAAAATAAGGGTCACTCCCCACTTTCTTGGATCACGAGGGTTCAGGTTGCACTTGATGCTGCTAGGGGCCTTGAATACATACATGAGCACACAAAAACTCATTATGTTCACCGTGATATCAAGACAAGTAACATTTTACTTGATGCTTCCTTTAGAGCAAAGATTTCAGATTTTGGGTTAGCAAAACTTGTTGGGAAAGCAAATGAGGGAGAAATTTCAACTACCAAAATGCTGGGAGTTCTTAGGAATTCACCTGATTCTATGAGCATGTCAAGCTTGAGAGAATATATTGATCCAAGTATGATGGATCTGTATCCCCATGATTGTTTGGCCATGTTGGCAAAGCAGTGTGTGGATGAGGACCCCATCTTACGACCTGATATGAGACAAGTTGTGATATCCCTTTCACAGATTCTCCTCTCTTCTGTTGAGTGGGAAGCAACTCTAGCTGGGAATAGCCAGGTTTTCAGTGGCCTTGTTCAGGGAAGATAG 1821 0.4338 MVILVQKLHWGLLLLFLLFQLHLHCSTCYPTEPMNCTDTSRLCTSFIAFKPGPNHTLALIQSMFDVLLDDITVEGNGWGYMFIRKNCSCAAGIKKYVSSTTFTVKSNEGLVYDTVMDAYDGLALLPNTTRRARNGAVVSLRLFCGCSSGLWNYLVSYVMRDGDSVESLASRFGVSMDSIERVNGIGNPDNVTVGSLYYIPLDSVPGDPYPLNNAAPPVPVPSPSFDNFSADQVYHKAHVPYGWIIGGLGVGLLLIILTVILCVCLRPSSCFADARTHEKDAEGKISHKFHILRNPSFFCGSGRYICGKHVEQKQTDGESSNHTITIPIPKASTLGPDVFDMDKPVVFTYEEIFSKTDGFSDSNLLGHGTYGSVYYSLLRDQEVAIKRMTATKTKEFMSEMKVLCKVHHANLVELIGYAASHEELFLVYEYAQKGSLRSHLHDPQNKGHSPLSWITRVQVALDAARGLEYIHEHTKTHYVHRDIKTSNILLDASFRAKISDFGLAKLVGKANEGEISTTKMLGVLRNSPDSMSMSSLREYIDPSMMDLYPHDCLAMLAKQCVDEDPILRPDMRQVVISLSQILLSSVEWEATLAGNSQVFSGLVQGR 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0234 606 SMART serkin_6 359 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g0234 606 SUPERFAMILY LysM domain 155 200 IPR036779 -
Aed2g0234 606 Pfam LysM domain 157 194 IPR018392 -
Aed2g0234 606 Gene3D Phosphorylase Kinase; domain 1 335 430 - -
Aed2g0234 606 ProSitePatterns Protein kinases ATP-binding region signature. 365 386 IPR017441 GO:0005524
Aed2g0234 606 SMART LysM_2 156 200 IPR018392 -
Aed2g0234 606 CDD LysM 155 199 IPR018392 -
Aed2g0234 606 Gene3D Transferase(Phosphotransferase) domain 1 432 548 - -
Aed2g0234 606 ProSiteProfiles LysM domain profile. 155 199 IPR018392 -
Aed2g0234 606 Pfam Protein tyrosine and serine/threonine kinase 363 532 IPR001245 GO:0004672|GO:0006468
Aed2g0234 606 ProSitePatterns Serine/Threonine protein kinases active-site signature. 478 490 IPR008271 GO:0004672|GO:0006468
Aed2g0234 606 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 34 523 IPR044812 GO:0019199|GO:0045087
Aed2g0234 606 SUPERFAMILY Protein kinase-like (PK-like) 338 578 IPR011009 -
Aed2g0234 606 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 519 606 IPR044812 GO:0019199|GO:0045087
Aed2g0234 606 PANTHER BNAA06G02020D PROTEIN 34 523 - -
Aed2g0234 606 PANTHER BNAA06G02020D PROTEIN 519 606 - -
Aed2g0234 606 ProSiteProfiles Protein kinase domain profile. 359 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g0234 606 Gene3D LysM domain 152 205 IPR036779 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0234 Aed-Chr2 1557615 1563496 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0234 32 606 Receptor kinase-like Gene Family AT1G51940 56.502 0.0 638
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Aed2g0234 PK_Tyr_Ser-Thr 1.3e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0234 - - gmx:100796989 1053.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0234 2 1557615 1563496 Aed2g0234 2 1557615 1563496 ECH
Aed1g1404 1 12906567 12911692 Aed2g0234 2 1557615 1563496 PCT