Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0227 ATGTTTCTCCATTCTGGGAACATATTGTCCCCAGTGCAGCAGCAACGAACGAATACGATGGATAAGCAGCTAGGTTTAAGTGGATCTCCATTCCCTAAGCTCTCTTCAGATGAGATTCTGGAATTGGAAAGAATATACAATGATATGGGACAAAAAATGCTCAATCGGAAGTTCTGCAAGGAGATTGCTAAACGTTTTAGTTCCTCATCAAATGGTACTGGTATAAGTTCCTTATCATGGAAACAGGTGCGGATGTGGTTCAAAAATAGACGGAGAATGTTACAGGATAAAGATTGCTCATTATCTGACCTGCTCAAACTATCTGCTGATCTTTCAGATTCACCACTTTTGGGAAAGTCAAAAGGTAAACGAGATGCAGATGTCCATGACGTGGCATTTGAAGCAAGATCTACAAAAGACATTGCATGGCATGATGTTTCAATGTTCCTGAACTACAGAGTTCTGAGCACAGGCGAACTTGAAGTCCGTCTACGATATACTGGATTTGGGAAAGAGCAGGATGAGTGGATGAATGTGAATTTGGGGGTGCGGGAGAGATCTGTTCCATTAGAACCTTCAGAATGTCACAAGGTGAAGGATGGAGATCTTGTACTATGTTTCCTGGAAAAAGAAGATTATGCCCTCTATTGTGATGCTCGAATTGTAGAAATCCAGAGGAGGATACACGATCCAATAGATTGTACGTGCACCTTCATTGTTCGATTTGTCCATGATAACACTGAGGAAGGAGTTTCTTGGAACCGGATATGCTGTAGGCCTACACAAGAGGAATCTGCTTTCTACCCAATTCTTGCCCTTGATCCCACCCTAAGTTCAAGTCCCTCCTTAAATCTCCCCCTAAATACCATAGAGTTCTTGTGGGGATAA 888 0.4223 MFLHSGNILSPVQQQRTNTMDKQLGLSGSPFPKLSSDEILELERIYNDMGQKMLNRKFCKEIAKRFSSSSNGTGISSLSWKQVRMWFKNRRRMLQDKDCSLSDLLKLSADLSDSPLLGKSKGKRDADVHDVAFEARSTKDIAWHDVSMFLNYRVLSTGELEVRLRYTGFGKEQDEWMNVNLGVRERSVPLEPSECHKVKDGDLVLCFLEKEDYALYCDARIVEIQRRIHDPIDCTCTFIVRFVHDNTEEGVSWNRICCRPTQEESAFYPILALDPTLSSSPSLNLPLNTIEFLWG 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0227 295 Gene3D - 32 96 - -
Aed2g0227 295 Gene3D - 190 262 - -
Aed2g0227 295 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 1 30 263 - -
Aed2g0227 295 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 30 263 IPR039276 -
Aed2g0227 295 Pfam Homeodomain 35 91 IPR001356 GO:0003677
Aed2g0227 295 Pfam SAWADEE domain 130 257 IPR032001 GO:0003682
Aed2g0227 295 Gene3D - 128 189 - -
Aed2g0227 295 ProSiteProfiles 'Homeobox' domain profile. 34 97 IPR001356 GO:0003677
Aed2g0227 295 CDD homeodomain 33 92 IPR001356 GO:0003677
Aed2g0227 295 SUPERFAMILY Homeodomain-like 34 92 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0227 Aed-Chr2 1497497 1501756 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Aed2g0227 SAWADEE 1.9e-37 CL0049
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0227 - - gmx:100800332 431.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0227 2 1497497 1501756 Aed2g0227 2 1497497 1501756 ECH