Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0226 ATGCCTGTTCTGCGTAGCGGAGCGCGCAAGGGCCGGGCAGCAGCAGCAGCAGAGAAACTACCACAAGAACCACAACAGGAGCAGCCGCCGCAGCAGAATCCGGTGGTGGAAGGGGAGGCGATTGCGACGAGAACACGTCGGCGGCGTGCGGCGGCGGCAGCAGCAGCGGCAGTGCCAAAAAGTGTCGACAATAACAATACCAATAACAAGCAGCAACAGGCGGAGCAGGAGCGGGTGGCGGTGATAAAGGAGAACGTAGAGAAAGCTGTTGCGGCGAGGGAGGGAGAGAATCGGGCAGCGAAGGAAGCTGTTGGTGGAGCGGAGAGGGAAGAGGTTGGGGAGAAAGAGATGGATGGGTGTGACAGTGGGGGTCGGAGCAATAAGGCCAATGCCGCTGCTGAAGATGACGCCAATACCCCTCAAGTTCCTCAGAAGATTCAAGTAGGTAATTCCCCTTGGTATAAAGTAGAAAGAAAACTTGGCAAGGGTGGATTTGGTCAAGTATACGTTGGACGACGTAGTGGTGGAAATTTGAATGAGAGAACTGGACCTGGAGCTATAGAGGTAGCATTAAAACTTGAGCATAGAACTAGTAAAGGATGTACCTATGGACCACCCTACGAGTGGCAAGTGTACAACACTCTCGGTGGCAGTCACGGTGTACCTCAAGTACACTACAAGGGCAGGCAGGGTGACTATTATGTCATGGTTATGGATATGCTGGGACCTAGTCTTTGGGATGTTTGGAATAATAGCAATCATCACATGACCACTGAAATGGTTGCTTGTATTGCCATTGAAGCAATATCTATATTGGAAAAAATGCACTCTCGAGGGTATGTGCATGGGGATGTGAAGCCTGAAAATTTTCTGCTTGGTGCTCCTGGGACACCTGATGAGAAAAAATTGTTCCTTGTAGATCTGGGATTAGCTACTAAGTGGAGGGATAGTACAACAGGCTCGCATGTGGAATATGACCAAAGGCCAGATGTTTTCAGGGGCACAGTCCGCTATGCTAGTGTGCATGCACACTTAGGGAGAACTGCAAGCAGGAGGGATGACTTGGAATCTCTTGCATATACACTGATTTTTCTTCTCCGAGGTCGCCTTCCTTGGCAGGGGTTCCAGGGAGAAAACAAAGGATTTCTTGTTTGCAAGAAGAAGATGGGAACATCTCCAGAGACCCTATGTTGCTTCAGTCCCCAACCTTTTAAGCAGTTTGTTGAACATGTTGTAAACTTAAAGTTTGATGAAGAGCCTAACTATGCAAAATACATTTCTCTATTTGATGGGATTGTTGGTCCTAACCCAGATATTAGACCAATTAATACAGAAGGTGCACAAAAGCTCATTGGTCATAAGAGAGGCCGATTGGCAATGGAAGAAGAGGACGATGAACAACCCAAAAAGAAGATTCGTATTGGTTTGCCAGCATCCCAGTGGATAAGTGTTTACAATGCACGTAGACCAATGAAACAAAGATATCACTACAATGTATCAGATACAAGGCTATCCCAGCACATTGAGAAAGGAAATGAGGATGGCTTATATATTAGCGGTGTTGCTTCATCTCAGAATCTATGGGCATTAATCATGGATGCAGGGACAGGTTTCACTGCCCAAGTTTACAAGCTCTCACCCTTCTTTCTCCATAAGGAATGGATCATGGATCACTGGGAAAAAAGTTACTATATCAGCGCAATTGCTGGAGCTGTAAATGGGAGTTCGCTAGTAGTGATGTCTAAGGGCACACAGTATTTGCAGCAATCATACAAAGTTAGTGATTCATTTCCTTTCAAGTGGATTAACAAAAAGTGGAGGGAGGGATTTTACGTGACTGCAATGGCCACCTCAGGGTCGAGATGGGGAGTGGTCATGTCTCGTGGTGCGGGATTTTCAGACCAGGTGGTTGAACTAGATTTTCTGTATCCTAGTGAGGGGATTCACAAGCGTTGGGATATTGGATATCGAATCACAGCAACTGCTGCAACTTGGGACCAAGCTGCTTTCGTCCTGAGTGTTCCAAGGAGGAAGCCTTTGGATGAAACTCAGGAAACACTTAGGACTTCTGCTTTTCCTAGCACACATGTCAAGGAGAAGTGGGCAAAGAATCTCTACATTGCTTCCATTTGCTACGGACGTACAGTTTCTTGA 2154 0.4694 MPVLRSGARKGRAAAAAEKLPQEPQQEQPPQQNPVVEGEAIATRTRRRRAAAAAAAAVPKSVDNNNTNNKQQQAEQERVAVIKENVEKAVAAREGENRAAKEAVGGAEREEVGEKEMDGCDSGGRSNKANAAAEDDANTPQVPQKIQVGNSPWYKVERKLGKGGFGQVYVGRRSGGNLNERTGPGAIEVALKLEHRTSKGCTYGPPYEWQVYNTLGGSHGVPQVHYKGRQGDYYVMVMDMLGPSLWDVWNNSNHHMTTEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGAPGTPDEKKLFLVDLGLATKWRDSTTGSHVEYDQRPDVFRGTVRYASVHAHLGRTASRRDDLESLAYTLIFLLRGRLPWQGFQGENKGFLVCKKKMGTSPETLCCFSPQPFKQFVEHVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPINTEGAQKLIGHKRGRLAMEEEDDEQPKKKIRIGLPASQWISVYNARRPMKQRYHYNVSDTRLSQHIEKGNEDGLYISGVASSQNLWALIMDAGTGFTAQVYKLSPFFLHKEWIMDHWEKSYYISAIAGAVNGSSLVVMSKGTQYLQQSYKVSDSFPFKWINKKWREGFYVTAMATSGSRWGVVMSRGAGFSDQVVELDFLYPSEGIHKRWDIGYRITATAATWDQAAFVLSVPRRKPLDETQETLRTSAFPSTHVKEKWAKNLYIASICYGRTVS 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0226 717 SMART serkin_6 154 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g0226 717 MobiDBLite consensus disorder prediction 93 122 - -
Aed2g0226 717 CDD STKc_CK1 154 429 - -
Aed2g0226 717 Coils Coil 64 84 - -
Aed2g0226 717 ProSiteProfiles Protein kinase domain profile. 154 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g0226 717 MobiDBLite consensus disorder prediction 93 145 - -
Aed2g0226 717 ProSitePatterns Serine/Threonine protein kinases active-site signature. 280 292 IPR008271 GO:0004672|GO:0006468
Aed2g0226 717 MobiDBLite consensus disorder prediction 1 79 - -
Aed2g0226 717 PANTHER CASEIN KINASE 1-LIKE PROTEIN HD16 ISOFORM X1 102 692 - -
Aed2g0226 717 PANTHER CASEIN KINASE-RELATED 102 692 - -
Aed2g0226 717 SUPERFAMILY Protein kinase-like (PK-like) 154 433 IPR011009 -
Aed2g0226 717 Gene3D Transferase(Phosphotransferase) domain 1 119 473 - -
Aed2g0226 717 ProSitePatterns Protein kinases ATP-binding region signature. 160 192 IPR017441 GO:0005524
Aed2g0226 717 Pfam Protein kinase domain 154 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g0226 717 MobiDBLite consensus disorder prediction 60 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0226 Aed-Chr2 1492334 1499219 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0226 256 429 MAP Kinase Kinase Kinase AT5G50180 24.432 1.89e-08 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Aed2g0226 Pkinase 2.3e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0226 - - gmx:100799630 1288.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0226 2 1492334 1499219 Aed2g0226 2 1492334 1499219 ECH