Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0219 ATGGTTGTGTTCCTCACTGAACCCATTCTGCTCTGCTCTAGAAACCAAAAACCTTCCCACTTCGCAATGACACAACAACAAACAACCTCTTCCGAAACAACAACCTCTTCTTCCTCCTCCTCCTCGGCCTCTTCACAGGCCCAGGCCCAGGCCCAAAAGCAGAGCAAGAGGCCCAGGGACTGCAGCAAGCACCCGGTGTACCACGGCGTACGGAAGCGAAACTGGGGCAAATGGGTGTCCGAAATCCGGGAGCCGCGCAAGAAGTCCCGAATCTGGCTCGGGACATTTGCCACTCCCGAAATGGCGGCGCGAGCCCATGACGTGGCGGCTCTCACCATCAAGGGCCAGTCAGCAATCCTCAACTTCCCCGAAATCGCAGAGCTTCTCCCCCGCCCCGTCACGTGCGCCCCACGTGATATCCAGGCCGCGGCTACAGCCGCTGCCTCCATGGTTAAATTCGACCCTGTAACACAATCCTCTGAGTCTTCGGAGCTGAGCGAGATTGTGGAGCTTCCCAACATCGAAGACAGCAGCTTTGACTCCGTTGACTCTAGACCGGAGCTCGTGTTGGTGGACAGTTGGGTGTTTCCGCCAATGGGGTCTGACTCAGATGGAATCGAGTTCTGCGCAGCTTTTTCAGATGAGTTATTTCCGCAACAGAGTTTCATTGGGATTTGGCAGTAG 684 0.5599 MVVFLTEPILLCSRNQKPSHFAMTQQQTTSSETTTSSSSSSSASSQAQAQAQKQSKRPRDCSKHPVYHGVRKRNWGKWVSEIREPRKKSRIWLGTFATPEMAARAHDVAALTIKGQSAILNFPEIAELLPRPVTCAPRDIQAAATAAASMVKFDPVTQSSESSELSEIVELPNIEDSSFDSVDSRPELVLVDSWVFPPMGSDSDGIEFCAAFSDELFPQQSFIGIWQ 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0219 227 SMART rav1_2 66 129 IPR001471 GO:0003700|GO:0006355
Aed2g0219 227 MobiDBLite consensus disorder prediction 19 55 - -
Aed2g0219 227 MobiDBLite consensus disorder prediction 19 66 - -
Aed2g0219 227 Pfam AP2 domain 65 115 IPR001471 GO:0003700|GO:0006355
Aed2g0219 227 ProSiteProfiles AP2/ERF domain profile. 66 123 IPR001471 GO:0003700|GO:0006355
Aed2g0219 227 CDD AP2 67 124 IPR001471 GO:0003700|GO:0006355
Aed2g0219 227 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 32 215 - -
Aed2g0219 227 Gene3D AP2/ERF domain 66 125 IPR036955 GO:0003700|GO:0006355
Aed2g0219 227 PRINTS Ethylene responsive element binding protein signature 67 78 IPR001471 GO:0003700|GO:0006355
Aed2g0219 227 PRINTS Ethylene responsive element binding protein signature 89 105 IPR001471 GO:0003700|GO:0006355
Aed2g0219 227 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 32 215 - -
Aed2g0219 227 SUPERFAMILY DNA-binding domain 66 123 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0219 Aed-Chr2 1449655 1450569 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0219 20 204 AP2-EREBP Transcription Factor Family AT5G11590 49.309 2.35e-58 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aed2g0219 AP2 5e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0219 K09286 - gmx:100801780 325.479