Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0215 ATGGGTGGCATTGCATTTGGACGCTTTGATGATTCTTTCAGTTTCAACTCAATCAAGGCCTATATTGCTGAGTTCCATTCAACCTTGATCTTTGTTTTTGCCGGTGTTGGTTCAGCCATAGCCTATGGCAAGTTGACATCAGATGCAGCACTTGATCCTGCTGGGTTACTGGCAGTTGCTATTTGCCACGGTTTTGCACTCTTTGTTGCAGTTTCTGTTGGCGCCAACATCTCTGGTGGCCATGTCAACCCTGCTGTGACTTTCGGATTGGCTCTTGGTGGCCACATCACCATCCTCACTGGCCTCTTCTACTGGATTGCACAGCTTCTTGGCTCCATAGTCGCATGTTTTCTTCTCAACTATGTCACAGGAGGCTTGCCAATTCCAATCCACAGTGTGGCTTCCGGGGTAGGAGCTGTTGAAGGAGTAGTGACAGAGATCATCATCACATTTGGTTTGGTGTACACAGTGTATGCGACAGCAGCTGATCCTAAGAAGGGGTCATTGGGAACCATTGCACCCATTGCAATTGGTTTCATTGTTGGTGCGAACATATTGGCAGCAGGGCCATTCTCAGGTGGCTCAATGAACCCAGCACGCTCCTTTGGGCCTGCAGTTGTTAGTGGTGACTTCCATGACAACTGGATCTACTGGGTTGGACCTCTCATTGGTGGTGGCTTGGCTGGCCTTATCTATGGCAATGTCTTCATTCGCTCCTCTGATCATGCACCTCTTTCTAGTGAATTTTGA 750 0.4853 MGGIAFGRFDDSFSFNSIKAYIAEFHSTLIFVFAGVGSAIAYGKLTSDAALDPAGLLAVAICHGFALFVAVSVGANISGGHVNPAVTFGLALGGHITILTGLFYWIAQLLGSIVACFLLNYVTGGLPIPIHSVASGVGAVEGVVTEIIITFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGDFHDNWIYWVGPLIGGGLAGLIYGNVFIRSSDHAPLSSEF 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0215 249 PANTHER MIP PROTEIN 1 249 - -
Aed2g0215 249 PRINTS Major intrinsic protein family signature 100 119 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed2g0215 249 PRINTS Major intrinsic protein family signature 178 200 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed2g0215 249 PRINTS Major intrinsic protein family signature 145 163 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed2g0215 249 PRINTS Major intrinsic protein family signature 19 38 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed2g0215 249 PRINTS Major intrinsic protein family signature 215 235 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed2g0215 249 PRINTS Major intrinsic protein family signature 63 87 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed2g0215 249 Gene3D Glycerol uptake facilitator protein. 2 248 IPR023271 -
Aed2g0215 249 SUPERFAMILY Aquaporin-like 13 242 IPR023271 -
Aed2g0215 249 CDD MIP 19 235 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed2g0215 249 ProSitePatterns MIP family signature. 81 89 IPR022357 -
Aed2g0215 249 Pfam Major intrinsic protein 14 232 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed2g0215 249 PANTHER AQUAPORIN-8 1 249 IPR034294 -
Aed2g0215 249 TIGRFAM MIP: MIP family channel proteins 23 232 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0215 Aed-Chr2 1419495 1421308 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0215 1 247 Major Intrinsic Protein MIP AT3G16240 80.567 7.75e-144 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0215 K09873 - gmx:100306092 450.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0215 2 1419495 1421308 Aed2g0215 2 1419495 1421308 ECH