Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0214 ATGAGTACACACTTGGAACAAGATTACGTAGGCTTATCAGTGGCTCCATCAATGGAGAAAAGCTGTGATAAGATATCCTCTTCAGTTTCATCCAACCTCTCCTCTGAGGATGAGAACACTTCCTCTTTGAACTTCAAGGAGACAGAGCTGAGGCTTGGCCAGCCTGGTTGTGAGTTTCCTGAGAATTACAAATCAGCTGGGATCTCTCTTTTTGGCAAGGATTTGCAGAACAATATTAATAAGAATAATAATGGCTATTATGCTTCTTCAACTCCTTCCAAGAATCTCAAGAGGGGCTTCTCTGATGCCATTAGCTCTACTTCTTCCTCTTCTGGGAAATGGATATTCTCAGCAAGTGATGCAACTGATGCTGATTTTGGAAATGGTTCTAATACCTCTCCACGCTGCAATAAAGAGGTTGATATGGTTCCTCACTTTCAGAAGCCGCTGCCTCAGGTTGATAATCTGCTCAAGGTTTTGGTAAAGGTTATTAAAATATTAAGAGCACAAGTTGTGGGATGGCCACCAATTCGATCTTTTCGAAAGAACACCATGGCCTATAATCTGGCAAAATACAACAACGAAGCTGAAGAGAAATCAGGAGTTGGTTGTCTTTATGTAAAGGTGAGCATGGATGGTGCCCCTTATCTCAGAAAGGTTGATCTGAAAACCTACAGCAACTATATTGAACTTTCTTCAGCTCTTGAGAAAATGTTCAGCTGCTTCACCATTGGTCAATGCAATTCTCGTGCAGTTCCTGGGAGGGAGAGAGATGGATTAAGTGAGAGTGCATTCAGGGATCTTGTTGATGGCTCTGAATATGTTCTTACATATGAAGATAAGGATGGAGACTGGATGCTTGTGGGTGATGTCCCTTGGAAGATGTTCACTGAGTCATGTAAGAAACTAAGGATAATGAAAGGCTCTGAGGCAATCGGGCTAGCTCCAAGGGGTATGGAAAAATCTAGGAGCCAAAATTAA 981 0.421 MSTHLEQDYVGLSVAPSMEKSCDKISSSVSSNLSSEDENTSSLNFKETELRLGQPGCEFPENYKSAGISLFGKDLQNNINKNNNGYYASSTPSKNLKRGFSDAISSTSSSSGKWIFSASDATDADFGNGSNTSPRCNKEVDMVPHFQKPLPQVDNLLKVLVKVIKILRAQVVGWPPIRSFRKNTMAYNLAKYNNEAEEKSGVGCLYVKVSMDGAPYLRKVDLKTYSNYIELSSALEKMFSCFTIGQCNSRAVPGRERDGLSESAFRDLVDGSEYVLTYEDKDGDWMLVGDVPWKMFTESCKKLRIMKGSEAIGLAPRGMEKSRSQN 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0214 326 PANTHER AUXIN-RESPONSIVE PROTEIN 6 318 - -
Aed2g0214 326 ProSiteProfiles PB1 domain profile. 204 308 IPR000270 GO:0005515
Aed2g0214 326 SUPERFAMILY CAD & PB1 domains 204 307 - -
Aed2g0214 326 Pfam AUX/IAA family 47 317 IPR033389 -
Aed2g0214 326 Gene3D - 198 319 - -
Aed2g0214 326 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 6 318 IPR003311 GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0214 Aed-Chr2 1415841 1418300 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0214 207 311 B3 DNA Binding Superfamily AT2G46530 33.333 1.41e-07 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX or IAA Aed2g0214 AUX_IAA 1.8e-82 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0214 K14484 - gmx:100804782 477.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0214 2 1415841 1418300 Aed2g0214 2 1415841 1418300 ECH