Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0208 ATGATGGCTGGGAACCCTAACTGGTGGAGTATGCATCCACCATCTTTGATCCCTCCCCAGTATGTGCTTGGATCTTCTTCTTCAATTCCTTTTAATTCTTCTACACAAAACCAACAAGAGCCCCCTCAGTCATTGAGCCAACTTCTCTTCACTGGTTTACCAGGAGAGGAAGAGAGAGTTGCATTCAGTCATTTTCAATCAAAAAAGTTGGATGAATGGAATGAACAAATGCTTAATCCATCCCCTATGGTTGATGTTATAAAGCAAGAGGTTTCCCAAAGTGGTAACTTATATCACCATGGACATGGACATGATCATGATCAGGAATTTCAGATTTCTGGGGCACCTTGGTCACACATGGTGCCAGTTTCTTCTTCCCCTAGGTCTAGTGTCGCTAGCTTCAGCAGTAATAATTTATTGGATTTCACTTATAACAAGACAGATCATAGGAAGAACCAACTACCAGATCACACATCCGAGTGTAATAGCACAGCCACTGGTGGAGTTTATAAGAAGACTAAGAGTCAGCCATCTTCAAGCCAACCACCTCTTAAGGTGAGAAAGGAGAAGCTTGGTGATAGAATAACAGCTCTTCACCAGCTAGTTTCCCCATTCGGAAAGAGACAGATGACCGGTGTTGTGGTGTGTGTTTCACTTTTGCAGACTGACACAGCTTCTGTCTTGTTAGAAGCCATTGGATACATAAGATTCCTTCAGGGTCAAATTGAGGCACTCAGTTCTCCTTACTTGGGTAATGGATCAAAAAACATGAGGAATCCACAGTCTGTACACGGAGGAGAAAGAAATTCTGTATTTCCTGAGGACCCCGGTCAGCTGTTGAATGACAATGGCCTGAAAAGAAAGGGAGCTCCAAACCAGCAGGATGCAAAAGATAAGGCGCCAAAGGACTTGAGGAGTAGAGGGTTGTGCTTGGTTCCTGTGTCTTGCACCCAACATGTTGGAAATGAAAATGGAGCTGATTATTGGGCACCAGCATATGGCAGTGGATTTTAA 1014 0.4369 MMAGNPNWWSMHPPSLIPPQYVLGSSSSIPFNSSTQNQQEPPQSLSQLLFTGLPGEEERVAFSHFQSKKLDEWNEQMLNPSPMVDVIKQEVSQSGNLYHHGHGHDHDQEFQISGAPWSHMVPVSSSPRSSVASFSSNNLLDFTYNKTDHRKNQLPDHTSECNSTATGGVYKKTKSQPSSSQPPLKVRKEKLGDRITALHQLVSPFGKRQMTGVVVCVSLLQTDTASVLLEAIGYIRFLQGQIEALSSPYLGNGSKNMRNPQSVHGGERNSVFPEDPGQLLNDNGLKRKGAPNQQDAKDKAPKDLRSRGLCLVPVSCTQHVGNENGADYWAPAYGSGF 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0208 337 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 19 324 - -
Aed2g0208 337 CDD bHLH_AtbHLH_like 185 246 IPR045239 -
Aed2g0208 337 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 185 250 IPR036638 GO:0046983
Aed2g0208 337 MobiDBLite consensus disorder prediction 252 302 - -
Aed2g0208 337 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 175 238 IPR011598 GO:0046983
Aed2g0208 337 MobiDBLite consensus disorder prediction 252 266 - -
Aed2g0208 337 Gene3D - 185 254 IPR036638 GO:0046983
Aed2g0208 337 PANTHER OS05G0228400 PROTEIN 19 324 - -
Aed2g0208 337 MobiDBLite consensus disorder prediction 150 184 - -
Aed2g0208 337 MobiDBLite consensus disorder prediction 157 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0208 Aed-Chr2 1385916 1389283 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0208 55 279 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 41.085 3.09e-37 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0208 - - gmx:100802121 559.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0208 2 1385916 1389283 Aed2g0208 2 1385916 1389283 ECH