Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0198 ATGGGCGTCAACATGTCCAACACACCACCACACAACAAAGACTTGTTTTCCTCTCCAGCTCTCTCTCTTAGCTTAGCTGGGATTTTCCGGCATGCTGAGGCGGCGGAGACGGCCGGCATGGAGGTAGTCGGCGATGAGGTCCGGCGAGAGGACACTGTTGAGATAATTAGCAGCGACAACTCAGGACCCGTGAGATCCAGGTCAGATGAAGATTTTGATGGAGAAGGTGTTAACGCCGATGGCGATGGCGAAGACGAGAACGGTGGTTGTGATGGTGATGAGAAAGACAGACTGAAGAAGAAGAGGAAGTATCACAGGCACACCGCTGAACAGATCAGAGAAATGGAAGCGCTTTTCAAGGAATCACCGCATCCTGATGAAAAGCAGAGGCAACAACTCAGCGAGCAACTTGGCCTTGCTCCAAGGCAAGTTAAGTTTTGGTTCCAAAATCGTCGTACCCAAATCAAGGCAATCCAAGAGCGCCATGAGAACTCATTGTTGAAGACAGAATTGGACAAAGTAAGGGAGGAAAATAAGGCCATGCGCGAGGCCATAAACAAATCTTGTTGCTTCAATTGTGGCATGGTAACGGCTACCATAGATGCTTCCATGCCCACTGATGAAAAACAACTTCTTATTGAAAATGCCAAACTCAAAGTTGAGGTAGAGATGCTCCGAACAGCTTTAGGGAAATTGTCACCCAGGACAACTTCTCCTACATATTCTGGTGGGCATGATCATGAGAAAGAGAATAATAGAAGCTCTTTGGATTTTTACAATGGAATATTCGGGCTCGAGAAATCAAGGATAATGGAAATAGCAAACCGAGCAATGGAGGAATTCATTAAGATGGCTACTGTGGAGGAACCGCTATGGATTCGTAGCGTTGAGACTGGTCGCGAAATACTTAACTACGATGTATATGTGAAGGAGTTCATCGCAGTTCATAATAATTCAGCTAGTCAAAGGCCAAAGACATTCATCGAAGCCTCCAGAGAAACTGAGGTTGTTTTTATGGATCTTCCTCGGCTTCTCCAAAGTTTTCTAGATGTGAATCAATGGAAGGAATTGTTTCCGTGCTTAATATCAAAGGCTGCAACTGTTGATGTTATAAGCAATGGAGATGGTTCTAACAGGAATGGTGCAGTGCAATTGATGTTTGCTGAGCTTCAAATGCTGACTCCTATGGTGCCCACCAGAGAAGTGTATTTCGTAAGGTGCTGCAAACAGTTGAGTGATGAACAGTGGGCAATAGTTGATGTCTCCATAGACAACAACATTGACGCCGCGTCCCTTGTCAAATGCAGAAAACGCCCATCTGGCTGTATTATTCAGGACAATTCAAATGGCCATTGCAAGGTGATATGGGTGGAGCACATGGAGTGCCAAAAGAGCACAATTCATACATTGTATCGAACCATTGTGAACAGTGGTCTAGCTTTTGGGGCAAGGCATTGGACAGCAACACTACAACTTCAATGCGAGCGTTTGGTTTTCTACATGGCAACGAATGTTCCCATGAAGGATTCAACTGGTGTTGCGACGTTGGCTGGGAGGAAGAGCATCTTGAAGTTGGGACAAAGAATGTCATCGAGTTTCTGCCATGCAGTTGGTGCATCAAGTTTCCATACGTGGACCAAGCTCACAACTAAAACAGGACAAGACATTAGGATTAGCTCTAGGAAGAACTTGAATGACCCTGGTGAACCTCTTGGGGTTATCTTGTCTGCTGTTTCTTCTGTCTGGCTTCCTGTCTCTCCTAATGTTCTGTTTGATTTCTTGAAGGATGAAGCTCGTCGAAGTGAGTGGGATATCATTTCCAGTGGTGGGTCAGTGCAGTGCATTGCAAATTTAGCTAAAGGAAAACACCGAGGCAACGTTGTAAACATCCAAAAAATACAATCAAAAGATAACGGTACTGTGTGGATGTTGCAAGATAGCTGCACAAGTGGTTATGAGTCAATGGTGGTGTATGGTCAAGTGGAAATGGCTGGTATACAATCTGTGCTGACAGGATGTGATTCAAGTAATCTTGCCATATTGCCATCAGGGTTCTCAATTCTCCCTGATGGGATTCAGGGAAGGCCATTGGTGATTACGTCAATAAGGCAAGAAGAAAAATACACAGAAGAAGGAGGGTCTTTGTTTACAATGGCATTCCAGATCCTTGCCAACCCTTCTCCAACTGCCAAGTTGACAATGGAGTCTGTGGATTCGGTCAATCATCTTGTGTCTTGTACATTGAAAAATATTAGAACAAGTTTGCAGTGTGAAGATGATGATTAG 2286 0.4466 MGVNMSNTPPHNKDLFSSPALSLSLAGIFRHAEAAETAGMEVVGDEVRREDTVEIISSDNSGPVRSRSDEDFDGEGVNADGDGEDENGGCDGDEKDRLKKKRKYHRHTAEQIREMEALFKESPHPDEKQRQQLSEQLGLAPRQVKFWFQNRRTQIKAIQERHENSLLKTELDKVREENKAMREAINKSCCFNCGMVTATIDASMPTDEKQLLIENAKLKVEVEMLRTALGKLSPRTTSPTYSGGHDHEKENNRSSLDFYNGIFGLEKSRIMEIANRAMEEFIKMATVEEPLWIRSVETGREILNYDVYVKEFIAVHNNSASQRPKTFIEASRETEVVFMDLPRLLQSFLDVNQWKELFPCLISKAATVDVISNGDGSNRNGAVQLMFAELQMLTPMVPTREVYFVRCCKQLSDEQWAIVDVSIDNNIDAASLVKCRKRPSGCIIQDNSNGHCKVIWVEHMECQKSTIHTLYRTIVNSGLAFGARHWTATLQLQCERLVFYMATNVPMKDSTGVATLAGRKSILKLGQRMSSSFCHAVGASSFHTWTKLTTKTGQDIRISSRKNLNDPGEPLGVILSAVSSVWLPVSPNVLFDFLKDEARRSEWDIISSGGSVQCIANLAKGKHRGNVVNIQKIQSKDNGTVWMLQDSCTSGYESMVVYGQVEMAGIQSVLTGCDSSNLAILPSGFSILPDGIQGRPLVITSIRQEEKYTEEGGSLFTMAFQILANPSPTAKLTMESVDSVNHLVSCTLKNIRTSLQCEDDD 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0198 761 SMART START_1 272 496 IPR002913 GO:0008289
Aed2g0198 761 SUPERFAMILY Bet v1-like 540 748 - -
Aed2g0198 761 MobiDBLite consensus disorder prediction 55 107 - -
Aed2g0198 761 SUPERFAMILY Bet v1-like 265 496 - -
Aed2g0198 761 Pfam START domain 272 496 IPR002913 GO:0008289
Aed2g0198 761 Gene3D - 271 493 IPR023393 -
Aed2g0198 761 ProSiteProfiles START domain profile. 263 499 IPR002913 GO:0008289
Aed2g0198 761 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN GLABRA 2 14 758 - -
Aed2g0198 761 SUPERFAMILY Homeodomain-like 95 159 IPR009057 -
Aed2g0198 761 Gene3D - 89 170 - -
Aed2g0198 761 ProSiteProfiles 'Homeobox' domain profile. 98 158 IPR001356 GO:0003677
Aed2g0198 761 MobiDBLite consensus disorder prediction 75 89 - -
Aed2g0198 761 CDD homeodomain 101 156 IPR001356 GO:0003677
Aed2g0198 761 CDD START_ArGLABRA2_like 267 495 - -
Aed2g0198 761 Pfam Homeodomain 101 156 IPR001356 GO:0003677
Aed2g0198 761 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 14 758 IPR042160 -
Aed2g0198 761 SMART HOX_1 100 162 IPR001356 GO:0003677
Aed2g0198 761 ProSitePatterns 'Homeobox' domain signature. 133 156 IPR017970 GO:0000981|GO:0006355
Aed2g0198 761 Coils Coil 157 187 - -
Aed2g0198 761 MobiDBLite consensus disorder prediction 233 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0198 Aed-Chr2 1288253 1293493 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0198 56 759 Homeobox Transcription Factor Family AT1G79840 63.150 0.0 874
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Aed2g0198 START 1.9e-56 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0198 K09338 - gmx:100806193 1249.19