Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0187 ATGAACCGGCAAGGGCAAAGATCCGGTGCGACGGGGGTGCACCATAACCGCCAGTACTCCGAACACTCTCTCGACGCCTCTTCCAAGTGGTTTAACACTTCCTCCAATCACATTCCTCCTCTTCAGGACTACAATTTGTACGGTGGCGGAGGCAGAATGTATCGGAGCAACTTGCCGAGGAGCTTCAATGAGTATTGTATGGATCTGTCCACGCCTCCTCGGAGTTACGCCGTTAAGAAAAACAGCAACGGTAACGCCGACGAAGACGATTCTGCTCACGATTTCAGCCCTGGCCTCTTGGATCTCCACTCGTTCGATACAGAGCTTCTTCCTCAGATTACGTCCTCTAATGTGTATGAATCTGAGCCTTACATTTTCGGCAAACAAACTGTCAGAGCTCGCGCTTCCGAAAACAATGTCTCCAACAGTCTTGCTGCTGCGGACAATGTGAAATCTAGCAATGTGGCTAAGATTAAAGTTGTGGTTCGCAAGAGACCGCTTAATAAGAAGGAGATAGCTAAGCATGAGGAGGATATTATAGATACAGTTTCAAATTCTTTGACAGTGCACGAGACTAAACTTAAGGTTGACCTAACTCAGTATGTGGAGAAGCACGAATTTGTTTTTGATGCTGTCTTGAATGAAGAGGTTACAAATGATGAGGTGTATCGTGAAACAGTGGAGCCCATAGTTCCAATAATATTTCAACGCACTAAGGCAACTTGCTTTGCATATGGTCAAACAGGAAGTGGAAAAACTTACACAATGAAGCCACTGCCTCTTAAAGCATCAAGGGACATCTTGCGATTGATGCACCATACCTACAGGAATCAGGGATTTCAGTTGTTTGTGAGTTTCTTTGAAATATATGGTGGGAAGCTTTTTGATCTCCTTAATGATCGAAAAAAACTGTGCATGAGGGAGGATGGTAAGCAACAAGTTTGCATTGTTGGTTTGCAAGAGTACAGAGTGTCGGATGTAGAGACCATCAAGGAACTGATTGAACAAGGAAATGCCACAAGAAGTACTGGCACCACAGGTGCAAATGAGGAGTCTTCACGGTCACATGCAATACTTCAGCTTGCTATCAAGAGATCAGTTGATGGAAATGTATCCAAGCCCCCCCGTGTTGTTGGCAAGCTCTCCTTCATAGATCTTGCTGGTAGTGAACGTGGAGCAGATACCACAGATAATGACAAACAGACAAGAATAGAAGGTGCTGAGATCAATAAGAGCTTGCTTGCCTTAAAGGAATGCATTAGAGCTTTAGATAATGACCAAGGGCACATCCCATTCAGAGGCAGTAAATTGACTGAAGTTCTGAGGGATTCATTTGTTGGTGACTCCCGTACTGTTATGATATCATGCATCTCACCAAGTTCCGGTTCATGTGAACATACTCTGAATACATTAAGATATGCTGACAGGGTAAAAAGCTTATCAAAAGGGAACAACTCTAAGAAGGATGTTTTATCTTCAAATTTTAACCTTAAAGAATCAACTACTATTCCCTTGTCTTCGGTTAATACATATGCGTATGAGGATCGCACAGCTGATATATGGCCTGAAGAAAATGATGGGGATGAATTTAGTTCTCCTGAGGATTACTGTGAACCGGTGAAACCATCATGGAAGAAAAATGGAAAGATAGAGCCATATGGTGCAACAGATGATAAATTAAAGAAACCCAATGGCCAGATCAAATGGAAGGACATCCCAAAAGTTGAACCTAAAACAGTACATCCAGATGATGATTTGAATGCCCTCTTACAGGAAGAAGACGACCTTGTAAATGCTCACCGGAAACAAGTAGAGGAGACCATGAATATTGTTAGAGAGGAAATGAACCTCTTGGTTGAAGCAGATAAACCAGGTAATCAGCTGGATGATTATATAGCAAAACTAAATACAATTCTGTCTCAGAAGGCTGCTGGCATCATGCAGTTACAAACCCGTTTAGCTCAGTTCCAGAAGCGTTTAAAGGAGCATAACGTTTTGGCTTCATCTGCTGGTTACTAA 2019 0.4279 MNRQGQRSGATGVHHNRQYSEHSLDASSKWFNTSSNHIPPLQDYNLYGGGGRMYRSNLPRSFNEYCMDLSTPPRSYAVKKNSNGNADEDDSAHDFSPGLLDLHSFDTELLPQITSSNVYESEPYIFGKQTVRARASENNVSNSLAAADNVKSSNVAKIKVVVRKRPLNKKEIAKHEEDIIDTVSNSLTVHETKLKVDLTQYVEKHEFVFDAVLNEEVTNDEVYRETVEPIVPIIFQRTKATCFAYGQTGSGKTYTMKPLPLKASRDILRLMHHTYRNQGFQLFVSFFEIYGGKLFDLLNDRKKLCMREDGKQQVCIVGLQEYRVSDVETIKELIEQGNATRSTGTTGANEESSRSHAILQLAIKRSVDGNVSKPPRVVGKLSFIDLAGSERGADTTDNDKQTRIEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGDSRTVMISCISPSSGSCEHTLNTLRYADRVKSLSKGNNSKKDVLSSNFNLKESTTIPLSSVNTYAYEDRTADIWPEENDGDEFSSPEDYCEPVKPSWKKNGKIEPYGATDDKLKKPNGQIKWKDIPKVEPKTVHPDDDLNALLQEEDDLVNAHRKQVEETMNIVREEMNLLVEADKPGNQLDDYIAKLNTILSQKAAGIMQLQTRLAQFQKRLKEHNVLASSAGY 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0187 672 ProSitePatterns Kinesin motor domain signature. 379 390 IPR019821 GO:0003777|GO:0005524|GO:0007018
Aed2g0187 672 Coils Coil 646 666 - -
Aed2g0187 672 SMART kinesin_4 155 486 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed2g0187 672 Pfam Kinesin motor domain 163 479 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed2g0187 672 PANTHER KINESIN-RELATED PROTEIN 6 1 672 - -
Aed2g0187 672 PANTHER KINESIN-LIKE PROTEIN KIN-13B 1 672 - -
Aed2g0187 672 PRINTS Kinesin heavy chain signature 380 398 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed2g0187 672 PRINTS Kinesin heavy chain signature 346 363 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed2g0187 672 PRINTS Kinesin heavy chain signature 237 258 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed2g0187 672 PRINTS Kinesin heavy chain signature 430 451 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed2g0187 672 Coils Coil 601 621 - -
Aed2g0187 672 ProSiteProfiles Kinesin motor domain profile. 157 480 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed2g0187 672 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 480 IPR027417 -
Aed2g0187 672 CDD KISc_KIF2_like 157 478 - -
Aed2g0187 672 Gene3D Kinesin motor domain 130 483 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0187 Aed-Chr2 1235250 1240194 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0187 156 480 Calmodulin-binding Proteins AT5G65930 33.731 1.20e-44 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0187 K10393 - gmx:100802651 1282.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0187 2 1235250 1240194 Aed2g0187 2 1235250 1240194 ECH