Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0186 ATGACACGTAAGACAAAGATTTCTGCAACCACTTGTGGTGTTCCAACTTCCAAGGCTCAAAGTTTCATGTCACGAGATTTTGCAGTAGTGCAAACAAAATTGCCACCAGTGGCATTTGTTTTGGCCTATACTAAAAAGGTGAGGTCGGAGTTGTCTGTTTTTTTCCCATCTCACAAGAAATGGGAAGCAACAGTAACAAAATCTGATGCTGAGGGTGGTTTGAGGAATGAGAGTAGAATGGATTTCTGGCCAGAATTTCTTGCAAGCAATTCGGGAAGAGAGTTTGTAGCAGGTGGCTTTGGAGGCATTGCTGGTGTATTCACAGGTTATCCACTTGACACTGTCCGCATCAGATTACAGGACTCAAAAAATGGTTCTGCCTTCGGAATCTTTAAACAAATGGTGTCTAAGGAAGGACCAACTTCTTTGTACCGTGGCATGGCCGCACCATTAGCCACCGTTGTTTTTCAGAATGCAATGGTTTTCCAAACGTACGCAGTTCTGTCAAGGGCATTTGACTTATCTGTTTCTGCTAAAGACCCTCCTTCCTACAAAGGTGTTGCTTTAGGAGGAACGGGTGCAGGGGCTCTTCAATGTCTATTAATATCCCCAGTAGACTTGATCAAAATTCGACTTCAGCTGCAGAAGGCAAGCCAGATGACAGAATCAACAAAAGGCCCTGTAGGACTTGCCAAGAATATATGGAGAAAAGAAGGCCTTAGAGGCATTTATCGAGGACTTGGTGTCACAGTATTGAGGGATGGACCTTCTCATGGTTTATACTTCTGGACATATGAATACATGAGGGAACAACTTCACCCAGGTTGCAGAAAAAGTGGTGAATTGTGCTTGGACACTATGCTAATAGCGGGAGGATCAGCTGGTGTGGCGAGTTGGATTAGTTGCTACCCTCTTGATGTTGTCAAGACAAGACTACAAGCTCAAACACCCTCTTCTCTCAAGTACAAAGGCATTGTAGATTGTTTCAAAAAAAGTGTTAACGAAGAAGGTTATTCTGTGCTATGGCGGGGTTTAGGAACTACAGTTGGCAGAGCCTTCCTAGTAAATGGTGCCATTTTTTCTGCTTATGAGATTACACTAAGATTACTGTTTAACGATGGAAGTATTCAAATGAAGGAAACTATTTAA 1149 0.4282 MTRKTKISATTCGVPTSKAQSFMSRDFAVVQTKLPPVAFVLAYTKKVRSELSVFFPSHKKWEATVTKSDAEGGLRNESRMDFWPEFLASNSGREFVAGGFGGIAGVFTGYPLDTVRIRLQDSKNGSAFGIFKQMVSKEGPTSLYRGMAAPLATVVFQNAMVFQTYAVLSRAFDLSVSAKDPPSYKGVALGGTGAGALQCLLISPVDLIKIRLQLQKASQMTESTKGPVGLAKNIWRKEGLRGIYRGLGVTVLRDGPSHGLYFWTYEYMREQLHPGCRKSGELCLDTMLIAGGSAGVASWISCYPLDVVKTRLQAQTPSSLKYKGIVDCFKKSVNEEGYSVLWRGLGTTVGRAFLVNGAIFSAYEITLRLLFNDGSIQMKETI 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0186 382 ProSiteProfiles Solute carrier (Solcar) repeat profile. 285 369 IPR018108 -
Aed2g0186 382 ProSiteProfiles Solute carrier (Solcar) repeat profile. 182 271 IPR018108 -
Aed2g0186 382 PANTHER CARNITINE/ACYLCARNITINE CARRIER-LIKE PROTEIN 80 372 - -
Aed2g0186 382 Pfam Mitochondrial carrier protein 188 272 IPR018108 -
Aed2g0186 382 Pfam Mitochondrial carrier protein 288 372 IPR018108 -
Aed2g0186 382 Pfam Mitochondrial carrier protein 92 172 IPR018108 -
Aed2g0186 382 SUPERFAMILY Mitochondrial carrier 93 364 IPR023395 -
Aed2g0186 382 Gene3D Mitochondrial carrier domain 92 375 IPR023395 -
Aed2g0186 382 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 80 372 - -
Aed2g0186 382 PRINTS Mitochondrial carrier protein signature 291 313 IPR002067 GO:0055085
Aed2g0186 382 PRINTS Mitochondrial carrier protein signature 244 262 IPR002067 GO:0055085
Aed2g0186 382 PRINTS Mitochondrial carrier protein signature 107 121 IPR002067 GO:0055085
Aed2g0186 382 PRINTS Mitochondrial carrier protein signature 94 107 IPR002067 GO:0055085
Aed2g0186 382 PRINTS Mitochondrial carrier protein signature 197 215 IPR002067 GO:0055085
Aed2g0186 382 ProSiteProfiles Solute carrier (Solcar) repeat profile. 89 171 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0186 Aed-Chr2 1231184 1234581 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0186 80 373 Antiporters AT1G79900 67.458 7.54e-139 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0186 K15109 - gmx:100812056 520.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0186 2 1231184 1234581 Aed2g0186 2 1231184 1234581 ECH