Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0178 ATGCCATCAAAGAAGATTCCAAAATCCCTTCGAGACTACTTCTCCAAGATCAAAACCCCCCAACGAACACAAATCCGATTACCCTCTAAGAAATGGATCCTCAAGGGGTGCAAGCATCCTAGGACTCCTTCTCTCGACATAGACAACATGAACAACAACGTTGTCAAAGACGATGAAGCCATGTTAGCAGACATCGACCGTTTCCTCTTTGAAAATTTCAAGTCCCTGTTCCTCGAAGACCGTGACGAAACCGCTAACAACAAAAACCGCAAGGAAGAAAAGTCTTCCAAACAGGGCCCCATCAGGTTTGACTCTTCTGGAAGGTTCGAGGATTCGCCACTTAACCTCTTCAACGACACAACCACCGAAGAGGGATCCAGCTCCGCCATGTCGGAGACCGAGGTCGCGGACGCGGAGGACCAGACGGTGGTCCCGGGCAACTGCGTCGTGGTGCTGGCCAACTCGGCGAGCCCTAGCGATGATTTCCGCCGATCCATGGAGGGCGTGGTGAAAGCCAGATTGACGAATTGTGAAAACGTGGATTGGGACTTCATGCAGGAGCTTTTGTTCTGTCACATGAACCTCAACCAGAAGAAGTCGCACAAGTTCATTCTCAGCGCCTTTGTCGACGTCGTCTCCTCCATGCGCAGCCCGCCGGAGATTACTCCGGCGCAGCCGAGTCCGCCGCGGAGCGTTCGAACGGTTCGGATCGGAAGGGAGGTGCGGAAGAAGACCAAGGAAGCAGTAACCTTGGAATTTGGGTCGCCGTAA 771 0.5305 MPSKKIPKSLRDYFSKIKTPQRTQIRLPSKKWILKGCKHPRTPSLDIDNMNNNVVKDDEAMLADIDRFLFENFKSLFLEDRDETANNKNRKEEKSSKQGPIRFDSSGRFEDSPLNLFNDTTTEEGSSSAMSETEVADAEDQTVVPGNCVVVLANSASPSDDFRRSMEGVVKARLTNCENVDWDFMQELLFCHMNLNQKKSHKFILSAFVDVVSSMRSPPEITPAQPSPPRSVRTVRIGREVRKKTKEAVTLEFGSP 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0178 256 MobiDBLite consensus disorder prediction 84 99 - -
Aed2g0178 256 Pfam Transcriptional repressor, ovate 155 215 IPR006458 -
Aed2g0178 256 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 149 216 IPR006458 -
Aed2g0178 256 MobiDBLite consensus disorder prediction 84 127 - -
Aed2g0178 256 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 3 236 - -
Aed2g0178 256 ProSiteProfiles OVATE domain profile. 151 214 IPR006458 -
Aed2g0178 256 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 236 IPR038933 GO:0045892
Aed2g0178 256 MobiDBLite consensus disorder prediction 111 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0178 Aed-Chr2 1202258 1203638 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Aed2g0178 Ovate 3.1e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0178 - - gmx:100777653 381.333
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0178 2 1202258 1203638 Aed2g0178 2 1202258 1203638 ECH
Aed1g1454 1 13202874 13203650 Aed2g0178 2 1202258 1203638 PCT