Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0177 ATGAGCGTGGTGGGATTCGATTTCGGTAACGAGAGCTGCATTGTTGCGGTTGCGAGGCAGAGAGGGATTGATGTTGTGCTCAATGACGAGTCCAAGCGTGAAACCCCCGCCATTGTGTGCTTTGGTGACAAGCAACGCTTTATTGGCACTGCTGGTGCTGCCTCTACTATGATGAACCCTAAGAATTCTATCTCACAGCTTAAGAGACTCATTGGTAGGAAATTCGCTGATCCCGAATTGCAGCAGGATCTTAAGTCATTGCCGTTTCGTGTAACAGAGGGGAGTGATGGGTACCCGGTGATTCATGCACGACACTTGGGTGAGGCTAAGACCTTTACCCCTACTCAAGTGTTTGGAATGATGTTGTCGAATCTTAAGGAAATAGCGGAGAAGAATCTCACCACAGCTGTTGTTGATTGTTGCATTGGAATCCCGGTTTATTTTACTGATCTGCAGAGGAGGGCGGTGATTGATGCAGCTACTATTGCTGGTCTGCATCCGCTTCGGTTGATTCATGAAATGACTGCCACTGCCTTGGCCTATGGGATTTATAAAACTGACCTTCCTGACACCGAGCAGCTGAATGTTGCGTTTGTTGATGTTGGGCATGCTAGCATGCAAGTTTGCATTGCTGGATTCAAGAAAGGGCAGCTGAAAGTGTTGGCTCACGCCTACGATAGGTCTCTGGGTGGTAGGGATTTTGACGAGGTTTTGTTCCATCATTTTGCTGGGAAGTTTAAGGAGGAGTACAAGATTGATGTTTTGCAGAATGCCAGGGCTTGCATAAGGCTCAGGTCTTCCTGTGAGAAGATGAAGAAGATGCTTAGTGCAAATGCTGAGGCTCCTCTCAACATTGAGTGCCTGATGGATGAGAAGGATGTCCGGGGCTTCATCAAGCGAGATGAATTTGAGCAACTAAGTGTTCCAATTTTGGAACGTGTGAAGGGACCTCTAGAGAAGGCACTTGCTGAAGCAGGTTTTACCATCGAAAATATACACACGGTTGAGGTGGTTGGTTCAGGTTCTCGCGTACCAGCCATAAACAAAATATTGACTGAGTTTTTTAAAAAGGAGCCCAGGCGGACAATGAATGCTAGTGAATGTGTTGCTAAGGGCTGTGCGTTGGAATGTGCAATTCTTAGTCCAACGTTTAAAGTACGAGAATTTCAGGTCAACGAAAGCCTTCCTTTCTCGATTTCTCTTTCATGGAAAGGTTCTGGTCCAGATGCACAGGACAATGGACCAGAAAATCAGCAGAGTTCTCTTGTTTTTTCCAAGGGTAATCCCATACCAAGTATCAAGGCACTGACATTCTACAGGTCAGGAACATTTTCTGTTGATGTACAATATGGTGATTTAAGTGGGCTGCAAACACCTGCTAAAATTAGCACATATACTTGCTGTGATTCTTTTGTGTGTAAGCAGATTGGTCCTTTCCAAACTACAAATGGTGAAAGGGCAAAAGTTAAAGTGAAAGTTCGCTTGAATCTGCACGGAGTTGTTTCCCTTGAGTCTGCAATGCTCCTGGAAGAGGAAGAAGTTGAGGTTGCAGTTACCAAAGAAGCAGCAGGGGAAAATACCAAGATGGACATTGATGAAACCCCAGCTGAGGCTGCTGCACCTCCAGCCTCCAATGACACTGGTGCTAATAAGCAAGATGCAAAGGCTAGTACTGATGCCTCTGGGGTTGAAAATGGTGTCCCTGAGAGTGGAGATAAGCCTTTGCAATCGGATTCTGATACTAAGGTTCAGGCTCCAAAGAAAAAGGTTAAGAAAACAAACATTCCTGTAGCAGAGGTAGTTTATGGAGCAATGGTGCCTGGGGATATTCAGAAAGCAGTTGAGAAAGAGTTTGAAATGGCTTTGCAAGATCGTGTGATGGAAGAAACAAAAGACAAGAAAAACGCAGTTGAGGCTTATGTTTATGACATGAGAAACAAGCTCAATGACAAATACCAAGAGTTTGTCACTGCTCCAGAGAGAGAGGATTTTACTGCCAAACTTCAGGAAGTGGAAGATTGGCTTTATGATGAGGGTGAAGATGAAACGAAAGGTGTATATATTGCCAAGCTTGAAGAACTCAAAAAGCGAGGTGATCCAATTGAAGTGCGTTACAAAGAATTCACAGAGAGGGGTACTATAATTGAACAGCTCATCCATTGTATAAATAGTTACAGACAAGTTGCAATGTCGAATGATCCCAGATTTGAACACATTGACATTAAAGAGAAACAGAAGGTCTTAAATGAATGTGTTGAAGCTGAGAACTGGTTTAAGGAGAAGCAGCAGCAGCAGAGTTCACTTCCAAAATATGCCAACCCAGTACTCTTGTCAGCTGAAATAAGAAAGAAAACTGAAGCTGTTGATAGGTTCTGCAAGCCGATTATGACAACACCAAGGCCAGGCAAGGCGGCGGCTACTCCACCAGGACCAGCAACCCCATCTTCTCAGAGTGATGAGCAGCAGCAGCAACCTCAGGGAGATGCCTATGCCAACAGTAATGAGAATGCTGCTGGGAATAGCAGTAGTCAGGCTGCACCAGCAGCGTCCACTGAACCAATGGAGACTGATAAGTCTGAAAACACAGCCTCTGCCTAA 2598 0.4496 MSVVGFDFGNESCIVAVARQRGIDVVLNDESKRETPAIVCFGDKQRFIGTAGAASTMMNPKNSISQLKRLIGRKFADPELQQDLKSLPFRVTEGSDGYPVIHARHLGEAKTFTPTQVFGMMLSNLKEIAEKNLTTAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLIHEMTATALAYGIYKTDLPDTEQLNVAFVDVGHASMQVCIAGFKKGQLKVLAHAYDRSLGGRDFDEVLFHHFAGKFKEEYKIDVLQNARACIRLRSSCEKMKKMLSANAEAPLNIECLMDEKDVRGFIKRDEFEQLSVPILERVKGPLEKALAEAGFTIENIHTVEVVGSGSRVPAINKILTEFFKKEPRRTMNASECVAKGCALECAILSPTFKVREFQVNESLPFSISLSWKGSGPDAQDNGPENQQSSLVFSKGNPIPSIKALTFYRSGTFSVDVQYGDLSGLQTPAKISTYTCCDSFVCKQIGPFQTTNGERAKVKVKVRLNLHGVVSLESAMLLEEEEVEVAVTKEAAGENTKMDIDETPAEAAAPPASNDTGANKQDAKASTDASGVENGVPESGDKPLQSDSDTKVQAPKKKVKKTNIPVAEVVYGAMVPGDIQKAVEKEFEMALQDRVMEETKDKKNAVEAYVYDMRNKLNDKYQEFVTAPEREDFTAKLQEVEDWLYDEGEDETKGVYIAKLEELKKRGDPIEVRYKEFTERGTIIEQLIHCINSYRQVAMSNDPRFEHIDIKEKQKVLNECVEAENWFKEKQQQQSSLPKYANPVLLSAEIRKKTEAVDRFCKPIMTTPRPGKAAATPPGPATPSSQSDEQQQQPQGDAYANSNENAAGNSSSQAAPAASTEPMETDKSENTASA 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0177 865 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 638 IPR029047 -
Aed2g0177 865 Gene3D Actin; Chain A, domain 4 230 313 - -
Aed2g0177 865 Gene3D - 5 374 - -
Aed2g0177 865 CDD HSPA4_like_NDB 2 381 - -
Aed2g0177 865 Gene3D - 38 113 - -
Aed2g0177 865 PANTHER HSC70CB, ISOFORM G-RELATED 1 864 - -
Aed2g0177 865 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Aed2g0177 865 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 387 603 IPR029047 -
Aed2g0177 865 MobiDBLite consensus disorder prediction 810 865 - -
Aed2g0177 865 ProSiteProfiles Ig-like domain profile. 345 463 IPR007110 -
Aed2g0177 865 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 608 704 IPR029048 -
Aed2g0177 865 MobiDBLite consensus disorder prediction 793 865 - -
Aed2g0177 865 MobiDBLite consensus disorder prediction 545 559 - -
Aed2g0177 865 PANTHER HEAT SHOCK 70 KDA PROTEIN 14 1 864 - -
Aed2g0177 865 Gene3D - 186 360 - -
Aed2g0177 865 PRINTS 70kDa heat shock protein signature 140 160 - -
Aed2g0177 865 PRINTS 70kDa heat shock protein signature 332 348 - -
Aed2g0177 865 PRINTS 70kDa heat shock protein signature 363 383 - -
Aed2g0177 865 PRINTS 70kDa heat shock protein signature 30 42 - -
Aed2g0177 865 PRINTS 70kDa heat shock protein signature 2 15 - -
Aed2g0177 865 SUPERFAMILY Actin-like ATPase domain 195 380 IPR043129 -
Aed2g0177 865 MobiDBLite consensus disorder prediction 521 590 - -
Aed2g0177 865 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 717 804 IPR029048 -
Aed2g0177 865 Pfam Hsp70 protein 3 705 IPR013126 GO:0005524|GO:0140662
Aed2g0177 865 Gene3D - 607 714 IPR029048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0177 Aed-Chr2 1193436 1199056 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0177 4 405 Calmodulin-binding Proteins AT1G16030 36.543 1.76e-84 281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0177 2 1193436 1199056 Aed2g0177 2 1193436 1199056 ECH
Aed1g1456 1 13216504 13221734 Aed2g0177 2 1193436 1199056 PCT