Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0175 ATGGCATCAGCGGTTCTTGTGACCCTTTTGTTTCTGATGCCACTGTTCTATTACACACCCAATGTAGTCTTAGCAGCCATTATCATCACTGCTGTTGTAGGACTAATAGATTATCAAGGTGCATATAAGTTGTGGAAGGTTGACAAGCTTGATTTCTTGGCCTGCTTGTGCTCCTTTTTCGGTGTTTTATTCATTTCAGTGCCCTTAGGCCTTGGAATAGCGGTGGCAATATCAGTCTTCAAGATCTTGCTTCATGTCTCTAGGCCAAATACACTGATTTTGGGGAATATACCAGGGACGCCAATATTCCACAACCTAAACCATTATAGAGAAGCTTTGAGGATTCCTTCATTTATCATTATGGCTGTTGAGTCTCCCATCTACTTTGCTAATTCAACGTACCTACAAGAAAGGATACTGAGATGGGTTCGAGAAGAGGAAGAGCGAGTAAAAGCAAACAATGAAAGTACATTGAAGTGCATAATTTTGGACATGACTGCTGTTACAGCCATAGACACAAGTGGGATCGATACTCTGTGTGAATTCAGAAAGGTGCTGGACAAAAGATCACTTCAGCTTGTGTTGGCAAATCCTGTAGGAAATGTGATGGAAAAGTTGCATCAGTCAAATATTTTGGATTCCTTTGGGTTGAAAGGAGTCTATCTCTCAGTAGGAGAAGCTGTGGCTGACATTTCATCTTCCTGGAAAGCTCAGCCTTGA 720 0.4167 MASAVLVTLLFLMPLFYYTPNVVLAAIIITAVVGLIDYQGAYKLWKVDKLDFLACLCSFFGVLFISVPLGLGIAVAISVFKILLHVSRPNTLILGNIPGTPIFHNLNHYREALRIPSFIIMAVESPIYFANSTYLQERILRWVREEEERVKANNESTLKCIILDMTAVTAIDTSGIDTLCEFRKVLDKRSLQLVLANPVGNVMEKLHQSNILDSFGLKGVYLSVGEAVADISSSWKAQP 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0175 239 Pfam STAS domain 109 227 IPR002645 -
Aed2g0175 239 Pfam Sulfate permease family 1 56 IPR011547 GO:0016021
Aed2g0175 239 CDD STAS_SulP_like_sulfate_transporter 109 224 - -
Aed2g0175 239 ProSiteProfiles STAS domain profile. 108 231 IPR002645 -
Aed2g0175 239 Gene3D STAS domain 88 233 IPR036513 -
Aed2g0175 239 PANTHER SULFATE TRANSPORTER 1 239 IPR001902 GO:0015301|GO:0016020|GO:0055085
Aed2g0175 239 SUPERFAMILY SpoIIaa-like 113 230 IPR036513 -
Aed2g0175 239 PANTHER SLC26A/SULP TRANSPORTER-RELATED 1 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0175 Aed-Chr2 1186041 1190444 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0175 1 239 Inorganic Solute Cotransporters AT3G15990 75.519 7.95e-133 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0175 K17471 - gmx:100780331 451.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0175 2 1186041 1190444 Aed2g0175 2 1186041 1190444 ECH
Aed1g1460 1 13233184 13238756 Aed2g0175 2 1186041 1190444 PCT