Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0173 ATGATTCAAAATGGTTGCATTGTATCCCAAGGGTGCGCCCCTCTGAATTCTAGGTCACGCAACCATGTCATACCTAGTACCTCTGTCTTTCGATGCGCTTCAAGAATGCCTCCTAAGGTTGCCGCTGTCTCAAACATCCGGAGCTTTTGGGGACATAATTTGGAATGTGGTTCCTCGTTGTCAAGAGGAATGACATTGTCAAATGCGTTTGCTGCATCAGGCCTACGAGTAAGTGAGGGTCAAAATCTTCCCTTTCACACTCTCCCTGTGTTGCCCCGGTTGCACAAGTCCAACATGGCCCCTCGGGCATCGAAGGATGTCCCTACTAGCTTCCGTTATCCTCCAATGACCAAAAAACCGCAATGGTGGTGGAGATCATTAGCATGCCTCCCCTACCTCATGCCTCTCCATGAGACATGGATGTATGCCGAGACAGCATACAATCTTCACCCGTTTTTGGAATGCTTTGAATTCTACACGTACCCTTTTCTTATGGCAATTGGAAGCCTGCCTAGTTGGTTTCTCATGGCATACTTCTTTGTTGCATATCTTGGAATTGTGAGGAGAAAAGAATGGCCTCATTTCTTCAGATATCATGTTGTGATGGGAATGCTATTGGAGATTGCCCTGCAGGTTATAGGGACTGTGAGCCGTTGGATGCCACTGTCACTCTACTGGGGTAAACTGGGAATGCATTTCTGGACTGCCGTATCATTTGGTTATCTCTTTACTGTCTTGGAATCCATAAGGTGTGCTCTTATGGGTATGTACGCTAACATTCCTTTCATCTGTGACGCAGCATATATCCAAATACCATATGATTAA 825 0.4606 MIQNGCIVSQGCAPLNSRSRNHVIPSTSVFRCASRMPPKVAAVSNIRSFWGHNLECGSSLSRGMTLSNAFAASGLRVSEGQNLPFHTLPVLPRLHKSNMAPRASKDVPTSFRYPPMTKKPQWWWRSLACLPYLMPLHETWMYAETAYNLHPFLECFEFYTYPFLMAIGSLPSWFLMAYFFVAYLGIVRRKEWPHFFRYHVVMGMLLEIALQVIGTVSRWMPLSLYWGKLGMHFWTAVSFGYLFTVLESIRCALMGMYANIPFICDAAYIQIPYD 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0173 274 PANTHER PROTEIN TIC 20-II, CHLOROPLASTIC 1 274 IPR005691 -
Aed2g0173 274 PANTHER HIT-TYPE ZINC FINGER FAMILY PROTEIN-RELATED 1 274 - -
Aed2g0173 274 Pfam Chloroplast import apparatus Tic20-like 96 267 IPR005691 -
Aed2g0173 274 TIGRFAM 3a0901s05TIC20: chloroplast protein import component, Tic20 family 1 274 IPR005691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0173 Aed-Chr2 1177290 1178976 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0173 65 274 Chloroplast and Mitochondria Gene Families AT4G03320 39.815 6.03e-46 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0173 - - gmx:100818669 537.339