Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0166 ATGAAGAAAGAAAACAGTGTTACGCTGAAAGCTGGGGAGCTCCCTGGTCGATTGACTCGTGCTCGAGCTGCTGCTGCTCTTTGTGCATCTGGACAGCTACCCCCATTGAAAGAGAGAGCACAGCAAAATCAGAATCAGTTGTCCAGAGTCAATTCAAAAAGAGCAGCTTCTGATAATACATGTGTTCAGCGTAAAAAGAGAGCTGTTCTTCAGGAAGTTACTAATGTTTGCTGTGAAAATGCTTACAAGGGTTGTTTCAACTCAACTAAAATTCAGGCTAAGAAAAGCAAGCTGGCTAAGGCTGGTCCAATTAGTGTGTCCAAAGTGGCTCCTTCTGTTACTGTGGAGCCACTGCAGTTTCAAGCTGACTCCAAAACAAAGGAAACAACATTGCAGTCAGAAGATACTATGTGCTCAATTAATTTGGAAAACAATGAACTTCTATGCCTGAGTACCAATGATTGTAGCAAGGACTTTAGATTGCCTGAAAGTCAGATGTCTGGAATATCTGCCCATCCTTTGATTTCTCAGAAGAAAGACAAGAAAGATAACCTTCCGAAACTTTTGACTGCATTGAAGGATCAAGACATCACTAATATAGATGATGATCTTGAAGATCCCCAATCGTGCAGCCTCTATGCTGCTGATATCTATGACACCGTGCGTGTTGCTGAGCTTGCAAGAAGGCCTTATCCAAACTTTATGGACACAGTGCAGCGAGATATTACTCAAAGCATGCGTGGAATACTGGTTGATTGGCTTGTAGAGGTTTCTGAGGAATACAAATTGCTTACAGATACCCTTTACCTCACTGTGTATCTCATAGATTGGTTTCTGTCCAAAAATTACATTGAAAGACAAAGACTTCAGCTACTTGGCATCACCTGCATGCTAATTGCCTCGAAGTACGAAGAAATTAATGCCCCACGTATTGAAGATTTCTGCTTCATCACAGACAATACATACACGAAAGCTGAGGTACTAAAAATGGAGAGGCAAGTGTTGAAGTCGTCTGAATATCAACTGTTTGCTCCCACTATACAGACTTTTCTCAGGAGGTTTCTTCGGGCAGCACAAGCTTCATACAAGGACCCTTGCCTTGAATTGGAGTACCTGGCCAATTACCTAGCTGAACTAACACTGATGGAGTATGGTTTCTTGAATTTCCTTCCATCAATCATTGCTGCATCAGCTGTATTTCTTGCCAGGTGGACACTAGATCAGTCAAACCACCCATGGAATCCAACTCTTGAACACTATGGCTGTTACAAAGCATCAGATTTGAAAACCACAGTTGTTGCATTACAAGACCTACAGCTGAATACTGATGGCTGCCCTCTTGCTGCTGTCCGCACTAAATACAGACAAGACAAGTTTAAATGTGTAGCGGCTTTGTCTTCCCCAAAACTGCTTGAAGCTTTGTTCTGA 1428 0.4237 MKKENSVTLKAGELPGRLTRARAAAALCASGQLPPLKERAQQNQNQLSRVNSKRAASDNTCVQRKKRAVLQEVTNVCCENAYKGCFNSTKIQAKKSKLAKAGPISVSKVAPSVTVEPLQFQADSKTKETTLQSEDTMCSINLENNELLCLSTNDCSKDFRLPESQMSGISAHPLISQKKDKKDNLPKLLTALKDQDITNIDDDLEDPQSCSLYAADIYDTVRVAELARRPYPNFMDTVQRDITQSMRGILVDWLVEVSEEYKLLTDTLYLTVYLIDWFLSKNYIERQRLQLLGITCMLIASKYEEINAPRIEDFCFITDNTYTKAEVLKMERQVLKSSEYQLFAPTIQTFLRRFLRAAQASYKDPCLELEYLANYLAELTLMEYGFLNFLPSIIAASAVFLARWTLDQSNHPWNPTLEHYGCYKASDLKTTVVALQDLQLNTDGCPLAAVRTKYRQDKFKCVAALSSPKLLEALF 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0166 475 CDD CYCLIN 345 432 IPR013763 -
Aed2g0166 475 SMART Cyclin_C_2 345 468 IPR004367 -
Aed2g0166 475 Gene3D - 230 343 - -
Aed2g0166 475 Pfam Cyclin, N-terminal domain 216 341 IPR006671 -
Aed2g0166 475 SUPERFAMILY Cyclin-like 345 470 IPR036915 -
Aed2g0166 475 SUPERFAMILY Cyclin-like 205 341 IPR036915 -
Aed2g0166 475 Pfam Cyclin, C-terminal domain 345 467 IPR004367 -
Aed2g0166 475 PANTHER CYCLINS 46 475 IPR039361 -
Aed2g0166 475 PIRSF Cyclin_A_B_D_E 22 474 IPR039361 -
Aed2g0166 475 CDD CYCLIN 246 335 IPR013763 -
Aed2g0166 475 Gene3D - 216 464 - -
Aed2g0166 475 SMART cyclin_7 252 336 IPR013763 -
Aed2g0166 475 SMART cyclin_7 349 437 IPR013763 -
Aed2g0166 475 PANTHER CYCLIN-A2-4 46 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0166 Aed-Chr2 1105772 1111330 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0166 1 475 Core Cell Cycle Gene Families AT1G80370 54.184 3.55e-165 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0166 K06627 - gmx:100789757 834.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0166 2 1105772 1111330 Aed2g0166 2 1105772 1111330 ECH