Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0165 ATGGTTGGAGGTTCATTGGCAGGGTTGCAAGAGCACCTGAAGTTAGCCCGAGACTACGCTCTCGAAGGCCTCTACGACACTTCAATCATCTTCTTCGACGGCGCTCTCGCCCAGATTAACAAGCACCTAAGCAGTGTGGAAGACCCTCTAATCCGCACAAAATGGATGAATGTAAAGAAAGCACTTTCGGAGGAAACAGAAGTTGTGAAACAGCTAGATGCTGAGAGAAGGGCTTTCAAAGACAACCCCATTGGAAGAAGACGCCCTGCCTCGCCTCCCATTTCAGTCAAGTCCTCATCTTCCTTTGTTTTCCAGCCGTTGGATGAGTATCCCACTTCATCCAGCGGTCCTGGTCCTGCTCCCGTCATTGATGATCCCGATGTGTGGAGGCCGCCCAGCAGGGACACCTCCAGCCGGAGACCCGGGAGGCCCGGCCAAGTGGGTTCCCGGAAATCGGCGCAAGATGGGGCCTGGGCGCGTGGTGCTACTGCCAGAAGTGCTGCGACTGGGCGTGACGGTAAGCCAAAGAAGCCTCAATATGAAGGTCCTGATCCTGAATTGGCTGCAATGCTAGAAAGGGACGTGTTAGAAACCTCTCCTGGAGTTAGATGGGAAGATGTTGCAGGGCTTACTGAAGCAAAAAGGCTTCTAGAAGAAGCTGTTGTGCTTCCTCTGTGGATGCCTGAATATTTCCAGGGAATCAGGAGACCATGGAAAGGTGTCCTCATGTTTGGACCTCCAGGAACTGGGAAGACACTTCTTGCTAAAGCAGTTGCTACTGAATGTGGGACCACTTTCTTTAACGTATCTTCTGCTACTTTAGCTTCTAAATGGCGTGGGGAGAGTGAGCGCATGGTGCGGTGTTTGTTTGATCTTGCAAGATCATATGCACCAAGCACAATATTCATTGATGAAATTGATTCTCTATGCAATGCTCGGGGGGCATCTGGAGAGCATGAATCGTCCAGAAGGGTGAAGTCTGAACTTCTAGTTCAGGTTGATGGTGTAAGCAATAGTGCCACAAATGAAGATGGTAGCCGTAAAATAGTAATGGTTTTGGCCGCTACTAACTTCCCATGGGATATAGATGAGGCACTAAGGAGAAGGCTGGAAAAGCGTATATATATTCCTCTTCCAAATTTTGAGAGTCGTAAAGAGCTGATCCGGATAAACTTGAAAACTGTCGAGGCAAGTTGTGATGTCCAACGGAGTGTTTCTCAGGCTGACATTGAACGCCATGAGAAGTGGTTTACCGAGTTTGGATCAGCATAA 1272 0.4921 MVGGSLAGLQEHLKLARDYALEGLYDTSIIFFDGALAQINKHLSSVEDPLIRTKWMNVKKALSEETEVVKQLDAERRAFKDNPIGRRRPASPPISVKSSSSFVFQPLDEYPTSSSGPGPAPVIDDPDVWRPPSRDTSSRRPGRPGQVGSRKSAQDGAWARGATARSAATGRDGKPKKPQYEGPDPELAAMLERDVLETSPGVRWEDVAGLTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARSYAPSTIFIDEIDSLCNARGASGEHESSRRVKSELLVQVDGVSNSATNEDGSRKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRKELIRINLKTVEASCDVQRSVSQADIERHEKWFTEFGSA 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0165 423 PANTHER KATANIN P60 ATPASE-CONTAINING SUBUNIT A1 397 423 - -
Aed2g0165 423 PANTHER KATANIN P60 ATPASE-CONTAINING SUBUNIT A1 4 165 - -
Aed2g0165 423 PANTHER KATANIN P60 ATPASE-CONTAINING SUBUNIT A1 174 401 - -
Aed2g0165 423 MobiDBLite consensus disorder prediction 107 184 - -
Aed2g0165 423 Pfam ATPase family associated with various cellular activities (AAA) 241 378 IPR003959 GO:0005524|GO:0016887
Aed2g0165 423 Gene3D - 200 379 IPR027417 -
Aed2g0165 423 ProSitePatterns AAA-protein family signature. 350 369 IPR003960 GO:0005524|GO:0016887
Aed2g0165 423 Gene3D - 4 80 - -
Aed2g0165 423 SMART AAA_5 237 380 IPR003593 -
Aed2g0165 423 MobiDBLite consensus disorder prediction 80 99 - -
Aed2g0165 423 CDD AAA 235 378 - -
Aed2g0165 423 Coils Coil 62 82 - -
Aed2g0165 423 MobiDBLite consensus disorder prediction 170 184 - -
Aed2g0165 423 Gene3D - 380 398 - -
Aed2g0165 423 PANTHER AAA DOMAIN-CONTAINING 397 423 - -
Aed2g0165 423 PANTHER AAA DOMAIN-CONTAINING 4 165 - -
Aed2g0165 423 PANTHER AAA DOMAIN-CONTAINING 174 401 - -
Aed2g0165 423 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 192 403 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0165 Aed-Chr2 1095451 1098828 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0165 193 401 Calmodulin-binding Proteins AT3G56690 45.540 7.83e-43 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0165 K07767 - gmx:100820625 682.945
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0165 2 1095451 1098828 Aed2g0165 2 1095451 1098828 ECH