Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0133 ATGCCACCCAGGAAAAGGAGGGTGTGGCTTGGGACATTCGAGACAGCAGAGGAAGCAGCTAGAGCATATGATGAAGCAGCGATTTTGATGAGTGGAAGAAATGCAAAAACAAACTTCCCAGTTGGTGATAGCCAAAACAACAACAACCAGAGATCTTCTAGCAGTTCCTCTTCCACTAGTACCACATTGTCTGCAGTTCTGAGTGCAAAGCTTAGGAAGTGCTGCAAGTCCCCTTCACCTTCCCTCACATGCCTAAGGCTTGACACTGAGAATTCCCACATTGGGGTGTGGCAGAAGAGAGCAGGGCCTCGTTCAGACTCAAACTGGATCATGATGGTTGAGTTGGAAAAAAAGAACAGCGAGGGTCCTTCTTCTGATTCTGAATTGCCTGTTGTTGTTGTTGATGCCCCAGAGAAAGTAAAGCCTGAGGAAACCACTGCATTAGATGAGGAACAGAAAATGGCCCTACAGATGATAGAGGAGCTTCTTAATAGGAATTGA 501 0.4651 MPPRKRRVWLGTFETAEEAARAYDEAAILMSGRNAKTNFPVGDSQNNNNQRSSSSSSSTSTTLSAVLSAKLRKCCKSPSPSLTCLRLDTENSHIGVWQKRAGPRSDSNWIMMVELEKKNSEGPSSDSELPVVVVDAPEKVKPEETTALDEEQKMALQMIEELLNRN 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0133 166 MobiDBLite consensus disorder prediction 37 60 - -
Aed2g0133 166 CDD AP2 2 41 IPR001471 GO:0003700|GO:0006355
Aed2g0133 166 SMART rav1_2 2 46 IPR001471 GO:0003700|GO:0006355
Aed2g0133 166 MobiDBLite consensus disorder prediction 35 60 - -
Aed2g0133 166 Pfam AP2 domain 4 31 IPR001471 GO:0003700|GO:0006355
Aed2g0133 166 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR WIN1-LIKE 4 166 - -
Aed2g0133 166 Gene3D AP2/ERF domain 1 41 IPR036955 GO:0003700|GO:0006355
Aed2g0133 166 ProSiteProfiles AP2/ERF domain profile. 1 40 IPR001471 GO:0003700|GO:0006355
Aed2g0133 166 SUPERFAMILY DNA-binding domain 4 41 IPR016177 GO:0003677
Aed2g0133 166 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 4 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0133 Aed-Chr2 932098 933949 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0133 2 166 AP2-EREBP Transcription Factor Family AT1G15360 58.659 2.32e-59 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aed2g0133 AP2 6.3e-07 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0133 - - gmx:100796962 260.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0133 2 932098 933949 Aed2g0133 2 932098 933949 ECH