Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0132 ATGATTATTGATTTTCCATCTTCCCCTGTTAAAAGGAGAGACTTACTCACTCACACACATCCATTGTCATTTGTCACTGCTCCTTTCTCGGATCTCTCTCATTTCTTCTTCTCCTCCGCTTTCCCTTCACAAATGGCGCAAATTCTGCTTCATGGGACTCTCCACGCCACCATATTCGAGGTTGATAGGCTCAATGCTGAGGGTGGTGGCGGCAATTTTTTCAGCAAGCTCAAGCAAAACATCGAGGAGACTGTTGGTATTGGAAAGGGAGTTACTAAACTCTATGCAACCATTGATTTGGAGAAAGCAAGAGTAGGAAGGACTAGAATCATAGAAAATGAACATACTAATCCCAAATGGTATGAGTCTTTTCACATTTATTGTGCCCATCTGGCTTCAAATATTATATTCACTGTGAAAGATGATAATCCTATTGGGGCAACTTTAATTGGAAGAGCTTATGTGCCTGTTTCGGAGGTCTTGGATGGTGAGGAAATAGATAGGTGGGTTGAAATCGTGGACGGGGAAAAAAATCCAATTCCTGAGGTTAGTTTGTTGAAAAAAGATGGACTAATGGCTACTCATGATGAAGAAACCGCACAGTTCTTTGATGGCACTGAGAGATGGAGAAAGCAAGGTGGGAAGGATGTACTTGTTCCACTGAGAGAGCTTGAAGATGTCATTATTCCCCCATCCCCAGTAATGTTTCCTGAAGATCATGAGACATGGAATGTTCAGTTATTTAGATCTATTGATGAAAGTGAAGAATGCATTAATAAGGTGAATCAGGTTGCTGACAAATATTGGGATCTCTACTCTAGTGAGTCACTTGAGCATGACCTTCCCGGTCACCTTCTCCGCTACCCCATTGGGGTTGCCAGTGAAGGAGATGTCACTGAGCTGCCAGGATTTGAGTTCTTCCCTGACACCAAGGCTCGCATTCTTGGCGCCAAAGCTGACTACCTCCCCCCTATCCTCACTACTTAG 987 0.4347 MIIDFPSSPVKRRDLLTHTHPLSFVTAPFSDLSHFFFSSAFPSQMAQILLHGTLHATIFEVDRLNAEGGGGNFFSKLKQNIEETVGIGKGVTKLYATIDLEKARVGRTRIIENEHTNPKWYESFHIYCAHLASNIIFTVKDDNPIGATLIGRAYVPVSEVLDGEEIDRWVEIVDGEKNPIPEVSLLKKDGLMATHDEETAQFFDGTERWRKQGGKDVLVPLRELEDVIIPPSPVMFPEDHETWNVQLFRSIDESEECINKVNQVADKYWDLYSSESLEHDLPGHLLRYPIGVASEGDVTELPGFEFFPDTKARILGAKADYLPPILTT 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0132 328 PANTHER PHOSPHOLIPASE D 207 253 - -
Aed2g0132 328 PANTHER PHOSPHOLIPASE D 253 328 - -
Aed2g0132 328 PANTHER PHOSPHOLIPASE D 46 183 - -
Aed2g0132 328 Gene3D C2 domain 48 181 IPR035892 -
Aed2g0132 328 Pfam C2 domain 54 172 IPR000008 -
Aed2g0132 328 ProSiteProfiles C2 domain profile. 31 170 IPR000008 -
Aed2g0132 328 Pfam Phospholipase D C terminal 253 318 IPR024632 -
Aed2g0132 328 PANTHER PHOSPHOLIPASE D 46 183 IPR015679 -
Aed2g0132 328 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 51 175 IPR035892 -
Aed2g0132 328 CDD C2_plant_PLD 46 181 - -
Aed2g0132 328 SMART C2_3c 53 169 IPR000008 -
Aed2g0132 328 PANTHER PHOSPHOLIPASE D 253 328 IPR015679 -
Aed2g0132 328 PANTHER PHOSPHOLIPASE D 207 253 IPR015679 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0132 Aed-Chr2 919667 923564 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0132 254 328 Phospholipase D Gene Family (Wang group) AT3G15730 88.000 3.20e-39 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0132 K01115 - gmx:100794849 273.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0132 2 919667 923564 Aed2g0132 2 919667 923564 ECH
Aed1g1504 1 13532796 13538498 Aed2g0132 2 919667 923564 PCT