Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0117 ATGGCTTTTTGGTTTTGTTGCGGAAAAGTTTCCACTCGCAGAAGGCGAGGGAAAGAACAACCTACATGGCGGGTTTTTTCTTTGAAGGAATTACACTCTGCTACAAATAACTTCAACTATGATAACAAGCTTGGAGAAGGGGGCTTCGGCAGTGTGTACTGGGGCCAACTTTGGGATGGATCGCAAATTGCAGTGAAAAGATTGAAAGTTTGGAGCAACAGAGCAGAGACGGAATTTACCATTGAACTTGAAACATTGGCAAGAATACGACACAAGAATGTTCTCAGTCTCCGTGGCTACTGTGCAGAAGGACAGGAACGGTTAATTGTGTACGAGTATATGCAAAACCTGAGCCTCCACTCTCATCTTCATGGACATCACTCATTTGAATGCCTTCTTGATTGGAATCGGAGGATGAACATCGCAATTGGTTCTGCTGAAGGAATTAAATTTAGTGAAATTGCTGATCCAAGACTAAATGGAAAGTTTGTGGAGGGAGAGCTTAAAAGAGTTGTTTTAGTTGCACTTATGTGTGCTCAGGATCTACCTGAGAAGAGACCCACTATGCTTGATGTAGTAGAGCTACTCAAGGGAGAGGAATCTAAAGATAAATTTTCTCATATAGAGAACAGTGAAATGTTCACAAGCCTTCTAAGCAATGATGGGACATCAATATCATCAGTGGCTGAAGACAGTTTAGACTATATATCAGAAGAAAAAGAATTAGAACGGCCCTTGAAACTATGA 747 0.4123 MAFWFCCGKVSTRRRRGKEQPTWRVFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNRAETEFTIELETLARIRHKNVLSLRGYCAEGQERLIVYEYMQNLSLHSHLHGHHSFECLLDWNRRMNIAIGSAEGIKFSEIADPRLNGKFVEGELKRVVLVALMCAQDLPEKRPTMLDVVELLKGEESKDKFSHIENSEMFTSLLSNDGTSISSVAEDSLDYISEEKELERPLKL 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0117 248 Gene3D Transferase(Phosphotransferase) domain 1 22 150 - -
Aed2g0117 248 PANTHER BNAA05G14800D PROTEIN 4 151 - -
Aed2g0117 248 PANTHER OS01G0750732 PROTEIN 4 151 - -
Aed2g0117 248 Gene3D Transferase(Phosphotransferase) domain 1 151 216 - -
Aed2g0117 248 Pfam Protein tyrosine and serine/threonine kinase 40 151 IPR001245 GO:0004672|GO:0006468
Aed2g0117 248 SUPERFAMILY Protein kinase-like (PK-like) 20 151 IPR011009 -
Aed2g0117 248 PANTHER OS01G0750732 PROTEIN 150 243 - -
Aed2g0117 248 ProSiteProfiles Protein kinase domain profile. 38 248 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g0117 248 PANTHER BNAA05G14800D PROTEIN 150 243 - -
Aed2g0117 248 ProSitePatterns Protein kinases ATP-binding region signature. 44 66 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0117 Aed-Chr2 857886 861436 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0117 25 159 Trihelix Transcription Factor Family AT1G68690 46.324 5.01e-34 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Aed2g0117 PK_Tyr_Ser-Thr 2.9e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0117 - - gmx:100814204 304.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0117 2 857886 861436 Aed2g0117 2 857886 861436 ECH