Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0100 ATGGAGGAGGAGTCAGGGGAAAATTGGCCTTCCGATTCTTATTTGGAGGAGGAGGAGGAGGAGGTGGGTGATGTCGACGTGAACGTGAAGGATGAATTGTATTTTGATGATGAAGGATTTGGAAGTGATGATTCATTACTTTCTGGGTTGAGCGAGAGTACCGACAGAAAACGGGAACTCACGGAGAGGTTCCATGCACTTTCAGCCACCATACCTGGCTTCAAAAAGACGGACGAGACTTCAATCCTGGCGAAAGCAAGCAGCTATGTGAAACAACTTGAGGAACGTGTGAGGGAGCTAGAGCAAGAAGTGGTAGTAGTAGTTCAATCCAGCAGCAGCAGCAGAAGCAGGTCTTGCGAAGTGAACTCGAATGTCAACTATTGTAGTGTTCTTCCCGAGGTCAAAGTAAGAGTGTTAGAGAAAGACGTTCTGATCATAATTCACTGTTACAAACATAAGGGCATAATGCTCAAAATACTTTCCCACCTTGAAAATCTTCATCTCTCTGTAGTCAACAGCAGCGTCTTGCGATTTGGAAAATCCACTCTCGACATCACCATTATTGCTCAGATGGGTGAGGGATACAAGATGACAGTGGATGAACTAGTGAAGACACTGAGAGTAGCGATCTTGACTCATTAG 642 0.4517 MEEESGENWPSDSYLEEEEEEVGDVDVNVKDELYFDDEGFGSDDSLLSGLSESTDRKRELTERFHALSATIPGFKKTDETSILAKASSYVKQLEERVRELEQEVVVVVQSSSSSRSRSCEVNSNVNYCSVLPEVKVRVLEKDVLIIIHCYKHKGIMLKILSHLENLHLSVVNSSVLRFGKSTLDITIIAQMGEGYKMTVDELVKTLRVAILTH 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0100 213 MobiDBLite consensus disorder prediction 1 24 - -
Aed2g0100 213 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 44 93 IPR011598 GO:0046983
Aed2g0100 213 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 56 109 IPR036638 GO:0046983
Aed2g0100 213 Gene3D - 54 109 IPR036638 GO:0046983
Aed2g0100 213 PANTHER BHLH TRANSCRIPTION FACTOR 55 213 - -
Aed2g0100 213 PANTHER PROTEIN, PUTATIVE-RELATED 55 213 - -
Aed2g0100 213 Coils Coil 83 110 - -
Aed2g0100 213 SMART finulus 54 99 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0100 Aed-Chr2 712535 715954 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0100 56 210 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 44.706 2.09e-33 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0100 - - gmx:100527052 226.483