Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0098 ATGGGGGAGCCATGCCAAAAATATTGGTTTTCTGATATGGAAATACAAGATTTTGATTTCTTCAACCAGAAGATTGAGTCACTTGATCATGAAGAGGATCAGATCTTTCAAGAGATCATGCATCAGCCAGTTTTCTTTTCTGACAACGATACTCACTCTCCCAAAATTCAAAGTAAACCAATCCACGGTTATAATTACAGTACAGCCCTCGCCAACAAGAGTAGCAATAACAATAGCAATCTTGCGATGAAGAGCAGCGTCAGCTCCAACTTCATCTTCTCATCACAACGTGCACCAGAGAAACCTGCCACAGCGGCGGCCGCATACATTCTTTCTTTCGATGATTCCACCGTAGTCGCGGCTACCACCGGCCACGAAACCTACGGTGGAAAACAGCCCTACCACCACGAGCAAGTAGTGGTAGGGAGTACTGGTGGTGGCGTTGAACCTAAGGCCAGCAACCCAACAACAAGGAAAAATAGAAGCTCTGCAGAGACACTTGACCATATAATGACAGAGAGAAAAAGGAGACGTGAACTCACAGAGAGATTCATTGCACTTTCAGCCACCATACCTGGCTTAAAGAAGGTAATTATTAGTAACTCATGTCACATACTTTACAATGGAATAATTAATCACGTGTTAATTTCCTTTATTCAATAA 663 0.4299 MGEPCQKYWFSDMEIQDFDFFNQKIESLDHEEDQIFQEIMHQPVFFSDNDTHSPKIQSKPIHGYNYSTALANKSSNNNSNLAMKSSVSSNFIFSSQRAPEKPATAAAAYILSFDDSTVVAATTGHETYGGKQPYHHEQVVVGSTGGGVEPKASNPTTRKNRSSAETLDHIMTERKRRRELTERFIALSATIPGLKKVIISNSCHILYNGIINHVLISFIQ 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0098 220 MobiDBLite consensus disorder prediction 144 164 - -
Aed2g0098 220 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 27 197 - -
Aed2g0098 220 PANTHER BHLH TRANSCRIPTION FACTOR 27 197 - -
Aed2g0098 220 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 156 195 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0098 Aed-Chr2 684655 685485 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0098 161 197 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22750 64.865 1.02e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0098 - - gmx:100809956 239.195