Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0097 ATGAACGGCGAAATCTTCTTACACGAGCCCACTTCCAGCCTTTTGCTTCCAAAACCCCAAACGGCGTCGTCAGAGACGCTGGAAGGAATCGCCGCGGTCGTCGGAGAACACGTCCTCTTCGGAAACACGTCGACGTCGGAGCCACTCAAGAAGACAGGTGCCGTCTCGTCGTCGTTGTCGGTGAGCAAAAGCTACCGTGGAGTGAGGAAGCGTCCGTGGGGGAGGTGGTCAGCGGAGATACGCGACCGCATCGGGCGGTGCCGCCACTGGCTGGGGACCTTCGACACGGCTGAGGAGGCTGCGCGTGCCTACGACGCGGCGGCGAGGCGCTTGAGAGGCGCAAAGGCCAGGACTAACTTCAAGATACCCTCGGTGTTGCCACTTTTGCCCTCTACGGAAGGTGGTGGTGGAACCGTGAAGCCGAAAAGCGCGCGAAACAACGCTAGGAAGTGTTCCTCTGTGGAACAATTGTTCAGTGGGGTGCCTCAAGTTCGAAGAAGAGATGATGGTATCGGTCAGAATGGGAGTATGGAGATGGAGGTGGAGGTGGATTTCAAGCATGGTGTCAACTTTGCTGTTACGACCACTACTAGAATGGTGGTTTAG 606 0.5726 MNGEIFLHEPTSSLLLPKPQTASSETLEGIAAVVGEHVLFGNTSTSEPLKKTGAVSSSLSVSKSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGAKARTNFKIPSVLPLLPSTEGGGGTVKPKSARNNARKCSSVEQLFSGVPQVRRRDDGIGQNGSMEMEVEVDFKHGVNFAVTTTTRMVV 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0097 201 SMART rav1_2 64 127 IPR001471 GO:0003700|GO:0006355
Aed2g0097 201 PRINTS Ethylene responsive element binding protein signature 65 76 IPR001471 GO:0003700|GO:0006355
Aed2g0097 201 PRINTS Ethylene responsive element binding protein signature 87 103 IPR001471 GO:0003700|GO:0006355
Aed2g0097 201 ProSiteProfiles AP2/ERF domain profile. 64 121 IPR001471 GO:0003700|GO:0006355
Aed2g0097 201 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 18 165 - -
Aed2g0097 201 CDD AP2 65 122 IPR001471 GO:0003700|GO:0006355
Aed2g0097 201 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF084 18 165 - -
Aed2g0097 201 SUPERFAMILY DNA-binding domain 64 121 IPR016177 GO:0003677
Aed2g0097 201 Coils Coil 97 117 - -
Aed2g0097 201 Pfam AP2 domain 64 113 IPR001471 GO:0003700|GO:0006355
Aed2g0097 201 Gene3D AP2/ERF domain 63 122 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0097 Aed-Chr2 676609 677214 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0097 17 127 AP2-EREBP Transcription Factor Family AT1G80580 63.478 2.07e-31 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aed2g0097 AP2 2.1e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0097 - - gmx:102667667 254.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0097 2 676609 677214 Aed2g0097 2 676609 677214 ECH