Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0089 ATGGATAATCTTGAAAAACTGAAGAATGAAAATATCGATCTCGAGAGAATACCTTTGGACCAAGTCTTCGAACAGTTGAACTGTTCAAAGGAGGGTCTCACAACTGATGAAGGCCAAAAGAGGTTGCAACTTTTTGGGCCCAACAATAAGTTGCTGAAATTTTTGGGGTTTATGTGGAATCCTCTATCATGGGTGATGGAAGCGGCTGCTATCATGGCAATTGCATTGGCCAATGGAGGGGGCAAGCCACCAGATTGGCAGGACTTCGTGGGAATACTGGCATTGCTTGTTATCAACTCCACTATTAGTTTTATTGAAGAGAATAATGCAGGCAATGCTGCTGCTGCACTTATGGCAGGCCTTGCTCCCAAAACCAAGCAAGGAGAGCTTGAGGCTGTTGTAATCGCTACTGGGGTACACACCTTTTTTGGTAAGGCTGCTCACTTGGTGGACAGCACCAACCAAGTAGGGCACTTTCAGAAGATTGCCACACTCATAGCTGTCTATGCAAACTGGAGCTTTGCAAGGATGAAAGGAGTTGGGTGGGGCTGGGCTGGTGTCATCTGGCTTTACAGCATCATTTTCTACATTCCATTGGATTTTATTAAATTCGGCATTCGATATTTTTTGAGTGGCAGGGCATGGAATAATATTACCGAGAATAAGACTGCTTTCACAACAAAGAAGGATTATGGAAAGGAAGAGCGAGAAGCACAATGGGCTACAGCTCAACGCACGCTACATGGATTGAATCCTCCTGAAACAGATAACATATTTAGTGAAAAGAACAACTACCGCGAATTGTCTGAAATCGCAGATCAGGCTAGGAAACGAGCTGAAGTTGCAAGATTGCGGGAGCTTCACACATTGAAGGGACATGTTGAATCCGTCGTGAAACTCAAAGGACTGGACATCGATACAATTCAGCAGCATTACACTGTTTGA 945 0.4434 MDNLEKLKNENIDLERIPLDQVFEQLNCSKEGLTTDEGQKRLQLFGPNNKLLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGILALLVINSTISFIEENNAGNAAAALMAGLAPKTKQGELEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKIATLIAVYANWSFARMKGVGWGWAGVIWLYSIIFYIPLDFIKFGIRYFLSGRAWNNITENKTAFTTKKDYGKEEREAQWATAQRTLHGLNPPETDNIFSEKNNYRELSEIADQARKRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0089 314 PANTHER PLASMA MEMBRANE ATPASE 126 162 - -
Aed2g0089 314 PANTHER PLASMA MEMBRANE ATPASE 160 295 - -
Aed2g0089 314 Gene3D - 158 209 - -
Aed2g0089 314 Gene3D - 57 131 - -
Aed2g0089 314 PANTHER CALCIUM-TRANSPORTING ATPASE 126 162 - -
Aed2g0089 314 SMART Cation_ATPase_N_a_2 13 78 IPR004014 -
Aed2g0089 314 PANTHER PLASMA MEMBRANE ATPASE 4 126 - -
Aed2g0089 314 Coils Coil 265 285 - -
Aed2g0089 314 Pfam Cation transporter/ATPase, N-terminus 17 72 IPR004014 -
Aed2g0089 314 SUPERFAMILY Calcium ATPase, transmembrane domain M 12 167 IPR023298 -
Aed2g0089 314 PANTHER CALCIUM-TRANSPORTING ATPASE 4 126 - -
Aed2g0089 314 PANTHER CALCIUM-TRANSPORTING ATPASE 160 295 - -
Aed2g0089 314 Gene3D - 263 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0089 Aed-Chr2 629097 634798 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0089 160 314 Primary Pumps ATPases AT2G24520 80.000 1.14e-85 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0089 K01535 - gmx:100818997 309.301