Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0075 ATGCCAACTAACATCGGCGAAATCGTGTGTGTGACCGGTGCCGGCGGTTTCATAGCCTCTTGGCTCGTGAAACATCTCTTAGAGAAAGGCTACACTGTCAGAGGAACCGTCAGAAACCCAGGCACGTACGCACGCACATCTCTTATAAATAATGATCCGAAGAATGGTCATTTGAAAGAGTTGGAAGGAGCGAAGGAGAGGCTAACTCTGCATAAAGTTGATCTTTTTGATATTGACTCCATAACAGCTGCTCTTCACGGTTGCCACGGTGTCTTCCATACCGCTTCTCCGGTCACCGACAACCCTGAAGAGATGGTGGAACCAGCAGTGAATGGAACGAAGAATGTGATCACAGCAGCTGCAGAAGCAAAAGTGCGACGCGTGGTGTTCACTTCGTCAATTGGCACCGTCTATATGGACCCCAATACGAGTAGGGATGTCTTGGTTGATGAATCATTCTGGAGTGATCTCGAGTATTGCAAAAACACTAAGAACTGGTATTGCTATGGTAAGACAGTAGCAGAACAAACAGCATGGGATGTAGCAAAAGAGAGAGGGGTGGATTTGGTTGTGGTGAACCCAGTTTTGGTGATTGGACCATTGTTGCAACCAACCATAAATGCAAGTACAATTCACATCCTAAAGTACCTTACTGGCTCTGCCAAGACTTATGTAAATGCCACTCAGGCTTACGTGCATGTCAAGGATGTTGCTTTAGCTCACATTCTTGTTTATGAGACACCTTCTGCTTCTGGTCGATACATATGTGCCGAAACTTCTCTGCATCGTGCTGACCTAGTTGAAATTCTCGCCAAGTTTTTCCCCGAGTACCCAATTCCTACCAAATGTTCGGATGAAAAGAACCCGAGAGTAAAACCCTACATATTTTCTAATCAAAAGCTGAAAGATTTGGGATTGGAATTCACCCCAATCAAGCACTGTCTATATGAAACCGTTAAAAATCTGCAAGACAACGGCCATCTTCCTGTACCCCCAAACCAAGAAGAAGACTCTTATTGA 1020 0.451 MPTNIGEIVCVTGAGGFIASWLVKHLLEKGYTVRGTVRNPGTYARTSLINNDPKNGHLKELEGAKERLTLHKVDLFDIDSITAALHGCHGVFHTASPVTDNPEEMVEPAVNGTKNVITAAAEAKVRRVVFTSSIGTVYMDPNTSRDVLVDESFWSDLEYCKNTKNWYCYGKTVAEQTAWDVAKERGVDLVVVNPVLVIGPLLQPTINASTIHILKYLTGSAKTYVNATQAYVHVKDVALAHILVYETPSASGRYICAETSLHRADLVEILAKFFPEYPIPTKCSDEKNPRVKPYIFSNQKLKDLGLEFTPIKHCLYETVKNLQDNGHLPVPPNQEEDSY 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0075 339 Gene3D - 7 338 - -
Aed2g0075 339 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 6 332 - -
Aed2g0075 339 CDD FR_SDR_e 9 306 - -
Aed2g0075 339 Pfam NAD dependent epimerase/dehydratase family 9 250 IPR001509 -
Aed2g0075 339 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 6 332 - -
Aed2g0075 339 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 322 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0075 Aed-Chr2 544833 546407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0075 6 282 Monolignol Biosynthesis Gene Families AT1G80820 70.758 1.72e-138 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0075 K09753 - gmx:100799994 615.15