Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0074 ATGACTGTGACAGGTTCATCTTCTGGGCAGCCTCAGTTCATTGCCAGCAACGGTGGTAGTAACCGGAGCTCGTCGAATACGCCACTGATTGAAAACTCAGATACCGATCAAATTGTTGTACCTGATAGAAAAAGCTGGAAAAACTTGTTTGCATACGTGGGACCTGGATTTCTTGTTTCCATTGCATATATCGACCCAGGAAACTTTGAGACGGATCTTCAATCAGGGGCGCAATATAAATATGAGTTACTTTGGATCATATTGGTGGCATCATGTGCTGCTCTTCTCATTCAAACAATGGCAGCTAATCTTGGGGTTGTCACTGGAATGCACTTAGCAGAGCATTGTAGAGCTGAATATTCTAGGGTGCCCAACTTTATCCTTTGGGTGATTGCTGAAATTGCCGTAGTGGCTTGTGACATACCCGAGGTAATTGGGACAGCCTTTGCATTGAACATGCTCTTCAACATACCTGTTTGGATTGGTGTTCTTCTGACAGGACTCAGTACATTGATGCTCTTAGCATTACAGCAATATGGGGTTAGGAAACTTGAATTCTTGATTTCATTTCTAGTATTTACTATTGCTGGTTGCTTTTTGGCTGAGCTTGGATATGCAAAGCCAGTGGCCAAAGAAGTTGTGACGGGTCTTTTTGTTCCAAAACTTGAGGGGCATGGTGCCACTGGTCTTGCAATTTCACTTCTTGGGGCAATGCCACAATCTCTTCCTCCACTCAGCGCTGGTGCTTTCAAGGAAAATACCACGATCATTTGCAATTCTTCAAATTTAAGTGCTGAAGATCAGAACAACTGTCAGGATTTAGATTTGAACAAGGCCTCTTTTTTATTAAGAAATGTGTTGGGCAAATGGAGTTCAAAACTATTTGCAGTTGCTTTACTTGCATCGGGTCAAAGTTCTACTATAACAGGAACGTATGCAGGGCAATACATCATGCAGGGATTTCTTGATTTGCGACTGAAGTCATGGATTCGAAATCTGCTAACTCGTTGCTTAGCCATTGTTCCTAGTTTGATTGTTGCACTCATTGGTGGCTCTGCTGGAGCTGGGGAGCTCATCATAATTGCATCGATTTCGGCTGTTACTTGGATCATTGGTTCCCTCATCATGGGCATAAATATATACTATTTATTGACTGGCTTTGTGAAGTTGCTTCTTCATATTCACTTTAAAATTGTGACTAAGGTGTTTCTCGGGATATTGGGATTTTCGGGTGTGGCGCTATATATGGGAGGAATTGCGTACTTAGTGTTTCGCAAAAATAAAAAGACTACACACATTTTGGCATTTAGTAGTCCCGAAGATCAGGAAGTGGCAAATGAACAAGGTGAATGTGATATATCAATGTATAGTCTCCCAAGAGAAGACATAGTAAGCATGCAATTGCCTCAAAAAAGGAGTTCGGCACAGATTGATTAA 1437 0.4175 MTVTGSSSGQPQFIASNGGSNRSSSNTPLIENSDTDQIVVPDRKSWKNLFAYVGPGFLVSIAYIDPGNFETDLQSGAQYKYELLWIILVASCAALLIQTMAANLGVVTGMHLAEHCRAEYSRVPNFILWVIAEIAVVACDIPEVIGTAFALNMLFNIPVWIGVLLTGLSTLMLLALQQYGVRKLEFLISFLVFTIAGCFLAELGYAKPVAKEVVTGLFVPKLEGHGATGLAISLLGAMPQSLPPLSAGAFKENTTIICNSSNLSAEDQNNCQDLDLNKASFLLRNVLGKWSSKLFAVALLASGQSSTITGTYAGQYIMQGFLDLRLKSWIRNLLTRCLAIVPSLIVALIGGSAGAGELIIIASISAVTWIIGSLIMGINIYYLLTGFVKLLLHIHFKIVTKVFLGILGFSGVALYMGGIAYLVFRKNKKTTHILAFSSPEDQEVANEQGECDISMYSLPREDIVSMQLPQKRSSAQID 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0074 478 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 255 364 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aed2g0074 478 PRINTS Natural resistance-associated macrophage protein signature 181 202 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aed2g0074 478 PRINTS Natural resistance-associated macrophage protein signature 128 154 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aed2g0074 478 PRINTS Natural resistance-associated macrophage protein signature 156 175 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aed2g0074 478 PANTHER METAL TRANSPORTER NRAMP1 364 478 - -
Aed2g0074 478 MobiDBLite consensus disorder prediction 1 32 - -
Aed2g0074 478 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 14 238 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aed2g0074 478 Pfam Natural resistance-associated macrophage protein 255 363 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aed2g0074 478 Pfam Natural resistance-associated macrophage protein 69 238 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aed2g0074 478 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 364 478 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aed2g0074 478 PANTHER METAL TRANSPORTER NRAMP1 255 364 - -
Aed2g0074 478 PANTHER METAL TRANSPORTER NRAMP1 14 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0074 Aed-Chr2 538430 544058 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0074 19 471 Inorganic Solute Cotransporters AT1G15960 66.095 0.0 673
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0074 K21398 - gmx:100815628 782.326