Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0073 ATGGATCCACAGAATACCCCTCGGCCTAACCCCAGAAGCATAATCTTTAACAAGTACGAGATGGGGCGGGTCCTGGGGCAGGGAAATTTCGCCAAAGTTTACCACGGCCGAAATCTGAACAGCAACGAGAACGAGAGCGTAGCCATAAAGGTCATAAAGAAAGAGAAACTAAAAAAAGAGCGGCTCGTGAAGCAGATAAAACGCGAGGTATCGGTGATGAGGCTGGTGCGCCACCCCCACATCGTTGAACTCAAGGAAGTCATGGCCACTAAAGGAAAAATCTTTCTCGTCATGGAATACGTCAAGGGCGGTGAACTCTTCGCCAAAGTCAACAAAGGAAAACTCACCGAAGATCTCGCCAGAAAGTACTTCCAACAACTCATCAGCGCCGTCGATTTCTGTCACAGCCGCGGCGTCACCCACCGCGACCTCAAGCCCGAGAATCTCCTCCTCGACCAAAACGAAGACCTCAAAGTCTCCGACTTCGGACTCTCCGCGCTGCCCGACCAGCGCCGCGCCGACGGCATGCTCGTCACCCCCTGTGGGACCCCTGCTTACGTGGCACCCGAAGTCTTGAAGAAAAAAGGTTACGACGGTTCTAAGGCGGATATATGGTCCTGTGGGGTCATCCTCTTCGCTCTTCTCTGTGGCTATTTACCCTTCCAAGGTGAGAACGTTATGAGGATTTATCGAAAGGCTTTCAGAGCTGAATATGAATTCCCAGAATGGATTTCTCCGCAGGCCAAAAATCTTATTTCTAATCTCCTTGTTGCTGATCCTGCTAAAAGATATTCTATTCCTGATATAATGAAGGATCCTTGGTTTCAATTCGGGTTCATGAGGCCAATTGCGTTTTCTATTAAGGAGTCCAATGTTGAAGACAACATTGATTTCGACGACGACGAGGAGGAGGTCACATTGGGGAAACCTGCGAGGCCGTTTTACAATGCGTTTGAGATAATCTCGTCCTTGTCGCACGGGTTTGATCTTAGGAGTTTGTTTGAGACGAGGAAGCGGTCGCCGTCGATGTTTATATGCAAGTTTTCGGCTTCGGCGGTGTTGGCGAAGGTGGAGGCGGTGGCGAAGAAGCTGGACTTTAGGGTGACGGGGAAGAAGGAGTTTGTGGTGAGGATGCAGGGGGCGGACGAGGGTAGGAAGGGGAAGCTGGCCATGACGGTGGAGGTTTTCGAGGTGGCGCCGGAGGTGGCGGTGGTCGAGTTTTCTAAGTCTGCCGGAGATACGTTGGAGTATGTTAAGTTCTGTGAGGAGCAAGTGAGGCCTTCTCTCAAAGACATTGTTTGGAGTTGGCAGGGTGATCATAGTAATTAA 1329 0.5071 MDPQNTPRPNPRSIIFNKYEMGRVLGQGNFAKVYHGRNLNSNENESVAIKVIKKEKLKKERLVKQIKREVSVMRLVRHPHIVELKEVMATKGKIFLVMEYVKGGELFAKVNKGKLTEDLARKYFQQLISAVDFCHSRGVTHRDLKPENLLLDQNEDLKVSDFGLSALPDQRRADGMLVTPCGTPAYVAPEVLKKKGYDGSKADIWSCGVILFALLCGYLPFQGENVMRIYRKAFRAEYEFPEWISPQAKNLISNLLVADPAKRYSIPDIMKDPWFQFGFMRPIAFSIKESNVEDNIDFDDDEEEVTLGKPARPFYNAFEIISSLSHGFDLRSLFETRKRSPSMFICKFSASAVLAKVEAVAKKLDFRVTGKKEFVVRMQGADEGRKGKLAMTVEVFEVAPEVAVVEFSKSAGDTLEYVKFCEEQVRPSLKDIVWSWQGDHSN 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0073 442 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
Aed2g0073 442 CDD CIPK_C 316 430 - -
Aed2g0073 442 PANTHER CBL-INTERACTING PROTEIN KINASE 16 11 441 - -
Aed2g0073 442 Pfam NAF domain 314 369 IPR004041 GO:0007165
Aed2g0073 442 Coils Coil 49 69 - -
Aed2g0073 442 ProSiteProfiles Protein kinase domain profile. 19 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g0073 442 Gene3D Kinase associated domain 1, KA1 316 435 - -
Aed2g0073 442 ProSiteProfiles NAF domain profile. 310 335 IPR018451 GO:0007165
Aed2g0073 442 SMART serkin_6 19 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g0073 442 Gene3D Transferase(Phosphotransferase) domain 1 11 315 - -
Aed2g0073 442 ProSitePatterns Protein kinases ATP-binding region signature. 25 54 IPR017441 GO:0005524
Aed2g0073 442 Pfam Protein kinase domain 19 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g0073 442 PANTHER - 11 441 - -
Aed2g0073 442 SUPERFAMILY Protein kinase-like (PK-like) 15 276 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0073 Aed-Chr2 530139 531467 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0073 14 442 CBL-interacting serine-threonine protein kinases AT5G25110 62.587 0.0 562
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Aed2g0073 Pkinase 2.2e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0073 - - gmx:100812424 786.563