Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0053 ATGAAAATCAACATGAAGGAGTCGACGATGGTGCGGCCGGCGGAGGAGGTGGCGCGGCGGGTGGTGTGGAATTCGAACGTGGACCTGGTGGTCCCCAATTTCCACACGCCCAGCGTCTACTTCTATAGGTCGAACGGCGCATCCAACTTTTTCGATGGGAAGGTTCTGAAGGAGGCACTGAGCAAGGTGCTGGTGCCGTTCTACCCAATGGCTGGGAGGCTCCGGCGAGATGACGACGGTCGCGTGGAGATCGACTGCGACGGTCAGGGGGTGCTCTTCGTGGAGGCCGACACCGGCGCCGTCATCGACGATTTTGGTGACTTCGCTCCCACCCTTGAGCTCCGCCAGCTCATCCCCACCGTCGATTATTCACAAGGAATAGAAACCTATCCACTCTTGGTGTTACAGGTAACACATTTCAAATGTGGAGGGTTGTCCCTGGGAGTTGGTATGCAACATCACGTAGCAGATGGAGCCTCTGGTCTTCACTTCATCAATACATGGTCAGATGTGGCTCGTGGCTTGGATGTTTCCATTCCACCATTCATTGATCGTACAATACTTCGTGCTAGAGATCCACCTCGACCTGCTTTTGATCACATTGAATACAAGCCCCCACCAGCTATGAAATCAGACTCAGATAATGCTAATGCTGCAGCTGTCTCTATTTTCAAGCTGACACGTGACCAGCTCACCACACTGAAAGCCAAGTCCAAAGAAGATGGCAACACAATCAACTACAGTTCTTATGAGATGTTGGCGGGTCACGTGTGGAGAAGTGTATGCAAAGCAAGGGCACTTCCTGAGGATCAAGAAACCAAATTGTACATTGCAACTGATGGAAGGGCAAGGTTGCAACCTCCTCCACCACCAGGTTACTTTGGCAATGTGATATTCACAACCACGCCTATTGCCGTGGCTGGTGATCTCATGTCAAAACCAACATGGTATGCTGCAAGCAGAATCCACAATGCATTGTCACGAATGGACAACGAGTATTTGAGATCAGCTCTTGACTTTCTAGAACTTCAACCCGATCTAAAAGCTCTGGTTCGTGGAGCACACACTTTCAAGTGTCCAAATCTTGGCATCACTAGCTGGACTAGGCTTCCAATCCATGATGCTGACTTTGGTTGGGGAAGGCCAATATTCATGGGACCTGGTGGAATTGCATACGAGGGGCTATCTTTCATCATTCCAAGCTCAACAAATGATGCCAGCTTATCTGTTGCAATTGCTCTTCAGCCAGACCATATGAAGGTGTTTAAGGATTTCTTGTACGACATTTGA 1290 0.4977 MKINMKESTMVRPAEEVARRVVWNSNVDLVVPNFHTPSVYFYRSNGASNFFDGKVLKEALSKVLVPFYPMAGRLRRDDDGRVEIDCDGQGVLFVEADTGAVIDDFGDFAPTLELRQLIPTVDYSQGIETYPLLVLQVTHFKCGGLSLGVGMQHHVADGASGLHFINTWSDVARGLDVSIPPFIDRTILRARDPPRPAFDHIEYKPPPAMKSDSDNANAAAVSIFKLTRDQLTTLKAKSKEDGNTINYSSYEMLAGHVWRSVCKARALPEDQETKLYIATDGRARLQPPPPPGYFGNVIFTTTPIAVAGDLMSKPTWYAASRIHNALSRMDNEYLRSALDFLELQPDLKALVRGAHTFKCPNLGITSWTRLPIHDADFGWGRPIFMGPGGIAYEGLSFIIPSSTNDASLSVAIALQPDHMKVFKDFLYDI 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0053 429 Gene3D - 1 205 IPR023213 -
Aed2g0053 429 Pfam Transferase family 1 424 - -
Aed2g0053 429 Gene3D - 209 429 IPR023213 -
Aed2g0053 429 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 428 - -
Aed2g0053 429 PANTHER SHIKIMATE/QUINATE HYDROXYCINNAMOYLTRANSFERASE 4 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0053 Aed-Chr2 422035 426586 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0053 1 429 Monolignol Biosynthesis Gene Families AT5G48930 77.367 0.0 706
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0053 K13065 - gmx:100820075 817.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0053 2 422035 426586 Aed2g0053 2 422035 426586 ECH
Aed1g1564 1 13876483 13879705 Aed2g0053 2 422035 426586 PCT