Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0040 ATGATGAAGGGCGGCAAGGCTTGCGAGCTTTGTGATCAACAAGCTTCTCTCTATTGTCCCTCCGATTCCGCATTTCTCTGCACCGACTGCGACGCCGCCGTCCATGCCGCCAACTTCCTCGTAGCTCGCCACCTCCGCCGCCTCCTCTGCTCCAAATGCAACCGTTTCGCCGGAATTCATATCTCCGGCGATATAACACGCCATCTCTCATCCACCTGCAGCTCTTGCTCGCCGGAGAATCCTTCCTCTTCTACCTGCGTCTCCAGTTCCGAGTCTTGCGCTACGAAGCATATTAAGAAGAGGGAGAGGAGTTCCGTGGCCAACGACGACGCGGGGAAGAAGCGACGGAGAAATGACGGATCGGAGGTGTTTGAGAAATGGAGCAGAGAGATAGGGTTAGGATTAGGGGTGAACGGAAGTCGCGTGGCCTCGAACGCCCTGATCCTGTGCCTAGGAAAGTGGAGGTTGCTTCCGTTCAGGGTGGCCGCCGCGACGTCGTTTTGGTTGGGGCTGAGATTTTGTGGGGACAGAGGCCTTGCCACGTGTCAGAATCTGGCGAGGTTGGAGGCAATCTCTGGGGTGCCAGCTAAGCTGATTCTGGCCGCACATGCCAACCTCGCACGTGTCTTCACGCACCGCCGCGAATTGCAGGAAGGATGGGGCGAGTCTTAG 672 0.5744 MMKGGKACELCDQQASLYCPSDSAFLCTDCDAAVHAANFLVARHLRRLLCSKCNRFAGIHISGDITRHLSSTCSSCSPENPSSSTCVSSSESCATKHIKKRERSSVANDDAGKKRRRNDGSEVFEKWSREIGLGLGVNGSRVASNALILCLGKWRLLPFRVAAATSFWLGLRFCGDRGLATCQNLARLEAISGVPAKLILAAHANLARVFTHRRELQEGWGES 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0040 223 PANTHER B-BOX ZINC FINGER PROTEIN 32-LIKE 5 209 - -
Aed2g0040 223 CDD Bbox1_BBX-like 7 49 - -
Aed2g0040 223 ProSiteProfiles Zinc finger B-box type profile. 3 49 IPR000315 GO:0008270
Aed2g0040 223 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 5 209 - -
Aed2g0040 223 SMART bboxneu5 3 49 IPR000315 GO:0008270
Aed2g0040 223 Pfam B-box zinc finger 7 36 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0040 Aed-Chr2 369708 370379 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0040 8 223 C2C2-CO-like Transcription Factor Family AT3G21150 32.189 4.97e-27 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aed2g0040 zf-B_box 1.5e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0040 - - gmx:100781783 341.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0040 2 369708 370379 Aed2g0040 2 369708 370379 ECH