Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0023 ATGAGGCCGATGCAACTGCCACCGCCTTCCGGTTCTGGGCCCAACCCGGCCCCTAACAGCAGCAGCAAGGAGCAGCGACCCCAGAGGCGGCGCAAGGACCTGACGCTGCCGCTGCCGCAGAGGGACACAAATTTGGCGGTGCCGCTTCCTCTGCCTCCATCGGGGGCGGCGGGGGGAGGCGGAGCGAGCCAGCAGGCGTCGCAGCAGGTGATCCCGTTCTCAGAGCTGGAGAGACTGAACCGCATCGGGAGCGGGAGCGGAGGGACGGTGTACAAGGTGGTCCACCGGACGAGCGGGCGGGTGTACGCGCTGAAGGTGATATACGGGCACCACGAGGAGTCGGTGCGGCGGCAGATCCACAGGGAAATCCAGATCCTGAGAGATGTGGACGATGCGAACGTGGTGAAGTGCCACGAGATGTACGATCAGAACAGCGAAATCCAGGTGCTGCTGGAGTTCATGGACGGAGGGTCTCTGGAGGGGAAACACATACCGCAGGAGCAGCAGCTGGCAGATCTGTCGAGGCAGATACTTCGGGGGCTGGCGTACCTGCACCGGCGGCACATCGTGCACAGGGACATAAAACCCTCGAATCTGCTGATAAACTCGCGGAAGCAGGTGAAGATCGCAGACTTCGGGGTGGGTCGGATTCTGAATCAGACGATGGATCCGTGCAATTCGTCTGTGGGGACGATCGCTTACATGAGTCCGGAGAGGATAAACACAGACATAAATGATGGGCAATACGACGCGTACGCTGGGGACATATGGAGCTTTGGGGTTAGCATACTGGAGTTCTACATGGGAAGGTTTCCTTTCGCTGTTGGGAGACAGGGTGATTGGGCAAGTCTGATGTGCGCCATTTGTATGTCTCAGCCTCCGGAGGCTCCTCCTTCTGCTTCTCTTCACTTCAGGGATTTCATCCATCGCTGTCTTCAGCGCGATCCTTCTCGCCGTTGGTCTGCTTCCAGGTTGCTCGAACACCCCTTCATTGCTCCACCTCTTCTCTCCGCCAACCACAACACTCAGCTACTCCCTCCTCCGCCAAGGCCTCTTCCCTCCTCCTCCTCCTCCTAG 1077 0.5942 MRPMQLPPPSGSGPNPAPNSSSKEQRPQRRRKDLTLPLPQRDTNLAVPLPLPPSGAAGGGGASQQASQQVIPFSELERLNRIGSGSGGTVYKVVHRTSGRVYALKVIYGHHEESVRRQIHREIQILRDVDDANVVKCHEMYDQNSEIQVLLEFMDGGSLEGKHIPQEQQLADLSRQILRGLAYLHRRHIVHRDIKPSNLLINSRKQVKIADFGVGRILNQTMDPCNSSVGTIAYMSPERINTDINDGQYDAYAGDIWSFGVSILEFYMGRFPFAVGRQGDWASLMCAICMSQPPEAPPSASLHFRDFIHRCLQRDPSRRWSASRLLEHPFIAPPLLSANHNTQLLPPPPRPLPSSSSS 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0023 358 CDD PKc_MAPKK_plant_like 74 331 - -
Aed2g0023 358 Gene3D Transferase(Phosphotransferase) domain 1 158 342 - -
Aed2g0023 358 SUPERFAMILY Protein kinase-like (PK-like) 73 355 IPR011009 -
Aed2g0023 358 Pfam Protein kinase domain 77 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g0023 358 ProSitePatterns Protein kinases ATP-binding region signature. 82 105 IPR017441 GO:0005524
Aed2g0023 358 MobiDBLite consensus disorder prediction 1 15 - -
Aed2g0023 358 MobiDBLite consensus disorder prediction 1 68 - -
Aed2g0023 358 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE 4 26 349 - -
Aed2g0023 358 ProSiteProfiles Protein kinase domain profile. 76 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g0023 358 Gene3D Phosphorylase Kinase; domain 1 60 155 - -
Aed2g0023 358 SMART serkin_6 76 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g0023 358 ProSitePatterns Serine/Threonine protein kinases active-site signature. 189 201 IPR008271 GO:0004672|GO:0006468
Aed2g0023 358 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 26 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0023 Aed-Chr2 256515 257591 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0023 1 345 MAP Kinase Kinase Gene Family AT1G51660 68.715 8.09e-165 463
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Aed2g0023 Pkinase 3.5e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0023 K13413 - gmx:100818488 606.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0023 2 256515 257591 Aed2g0023 2 256515 257591 ECH